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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125601526, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMMGCAVLL VVVASMAGEA AGRFVVEKNS LRVTSPAGLR GVYECAIGNF GMPQYGGTMH  60
   61 GVVVYPKANK KACRSFDDFD LSFKPKPGGL PIFLLVDRGD CYFTTKGWNA QTAGAAAVLV 120
  121 ADDRLEPLIT MDSPESSGTD YIEKITVPSA LVTKKFGDDL KKALENGDMV NVLLDWRESL 180
  181 PHPDERVEYE FWTNSNDECG AKCDMQMNFV RNFRGTAQVL EKRGYTQFTP HYITWYCPEA 240
  241 FVLSKQCRSQ CINHGRYCAP DPEQDFNIGY DGKDVVLQNL IQICLFKVGN ETHKPWVWWD 300
  301 YVHDFSIRCP MKEKKYTREC ANGVIKSLGL DLERINKCVG DPEADEENPV LKAEQDAQIG 360
  361 QGSRGDVTIL PTLVVNNKQY RGKLEKSAVL KAVCSGFEET TEPDVCLSQE IQTNECLESN 420
  421 GGCWQDKTNN FTACKDTFRG RVCECPIARG VKFVGDGYTH CEASGVGRCQ INNGGCWKET 480
  481 KNGKTVSACS NEESKGCKCP PGFKGDGIKS CEDIDECKDK LFCQCKDCSC ENTWGSYECS 540
  541 CGGSNMLYMR EHDTCISKVA SSSVGWGFLW VIFFGLALAG IGAYAVYKYR LRSYMDSEIR 600
  601 AIMAQYMPLE NQETPNQHRP VEHADI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle