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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13422632, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRGSAMTR LKLAASLLAL LTAAPALAQT TSPAVSVAGA TAPTAQGGAN AVALLRDPTH  60
   61 PAKSVIAVNA KLGGLEFYGL DGQRITAVPG GEIYAVDTRE DGPRALVVAL DRQAGRLRLF 120
  121 ARDYASGAIA AVDARPLQLG YSGEGVCLHR SGRDGALYAF ALGDEGQLDQ WLLYPTADGK 180
  181 LDGRVVRRLH LSSEAKFCVA DDASGALYVA QEAVGVWRYD ADPEADPVPT IVDINRLGHL 240
  241 AGEVAGLALI NGGKGADYLI AANAEAGDYN VYDRSAGDRF IGAFKVETNG APAIQEPSGL 300
  301 FGVRAPIGER LPAGGLLIAD DRNVGANSKI LSWADIAASM KLALGQDTPS VEPSKVALVQ 360
  361 ATMETQPVAH DGDAADDPAI WVHPTTPAKS AIIATDKKGG MLVYDLSGKQ LQYLPDGKMN 420
  421 NVDLRDGFKL GGKAVTLIAA SDRTHKAIAL YTIDPETRLL TSVADGVQAS GLSDPYGLCM 480
  481 HRDRKGDMSV FVSDPDGLVR QYSLTATANG KVRAKAVRDL KFDTQTEGCV ADDETGALYI 540
  541 AEEDVALWKL GADARSGPAR KAIARVADNP ALKDDLEGVG LYIQPKGKGY LILSSQGNNT 600
  601 YAVFRREGDN AYVGSFAVTA NGDTDVDGIS ETDGLDVSSA SLGAGLEMGA FVAQDGRNIS 660
  661 PPEAQNFKLV PWSKISAKLG LP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle