YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30253889, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFISLTV LFVLVMSACS NGSTDKKNDA KGSKSETITY QSENGKVEVP ANPKRVVVLS  60
   61 SFAGNVMSLG VNLVGVDSWS KQNPRFDSKL KDVAEVSDEN VEKIAELNPD LIIGLSNIKN 120
  121 VDKLKKIAPT VTYTYGKVDY LTQHLEIGKL LNKEKEAKTW VDDFKKRAQD AGKEIKAKIG 180
  181 EDATVSVVEN FNKQLYVYGE NWGRGTEILY QEMKLKMPEK VKEKALKEGY YALSTEVLPE 240
  241 FAGDYLIVSK NKDTDNSFQE TESYKNIPAV KNNRVYEANM MEFYFNDPLT LDFQLDFFKK 300
  301 SFLGK

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	305	0.99