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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32812377
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTRSLIKGG GRLATTRSLV NNSTSLVLKN QFKKYSTSTP PKVAKSKSST IGKIFRYTFY  60
   61 TAVISVIGSA GLIGYKIYEE SQPVDQVKQT PLFPNGEKKK TLVILGSGWG AISLLKNLDT 120
  121 TLYNVVIVSP RNYFLFTPLL PSVPTGTVEL RSIIEPVRSV TRRCPGQVIY LEAEATNINP 180
  181 KTNELTLKQS TTVVSGHSGK DTSSSKSTVA EYTGVEEITT TLNYDYLVVG VGAQPSTFGI 240
  241 PGVAENSTFL KEVSDASAIR RKLMDVIEAA NILPKDDPER KRLLSIVVCG GGPTGVEAAG 300
  301 EIQDYIDQDL KKWVPEVADE LKVSLVEALP NVLNTFNKKL IDYTKEVFKD TNINLMTNTM 360
  361 IKKVNDKSLI ANHKNPDGST ESIEIPYGLL IWATGNAPRD FTRDLIAKVD EQKNARRGLL 420
  421 VDERLKVDGT DNIFALGDCT FTKYPPTAQV AFQEGEYLAN YFDKLHAVES LKYTIANPTP 480
  481 KDNVEKLSRK LARLEKNLPH FIYNYQGSLA YIGSEKAVAD LVWGDWSNIS SGGNLTFLFW 540
  541 RSAYIYMCLS VKNQVLVVLD WAKVYFFGRD CSKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle