YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7652
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFPKKKNKK KAIKTWRHLL LLLTQLPRII PVNSDYLVSH IKTRISAKLL YPFLIPVSFL  60
   61 TLLISYRYSL PHNKLFNSNS TMSSHRHNTV QSVSRVYADV LSTKPQSYWD YDDLNIKWNP 120
  121 QENYEILRKL GRGKYSEVFL GIDLEKREKV VIKVLKPVKR KKIKREISIL KNLVDGPNII 180
  181 AMLDVVREPQ SKTPGLIFEH INNIDFRSLY PTFTDYDIRF YMYELLKALD YSHSMGIMHR 240
  241 DVKPHNVMID HDKKLLRLID WGLAEYYHPG TEYNVRVASR YFKGPELLVD YRLYDYSLDM 300
  301 WSFGCMLASM VFMKEPFFHG KSNTDQLVQI VRVLGSKNFK KYLEKYNISL GEEYEDIGYY 360
  361 NKRQWVRFMN ENNKDLVSQE FLDLIDRLLR YDHQERLTAK EAMKHAYFDP IRVAVS

Type	Start	End	Confidence
Signal Peptide	1	34	0.94
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	416	0.98