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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: URDA_SHEON
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYKKSIIGI AVTATAIIAG CQVTHQIVKS QGTAQGKHGE VQVETTFKDG HIVAIDVLKQ  60
   61 KENKVLAGAV FKDVKQAIID NNSIEVDGIA GATVTSKALK EAVGKSIEAA GVTLVATASA 120
  121 KKSEALTPAE YTYDVVIIGS GGAGFSAGLE AIAAGRSAVI IEKMPIIGGN SLISGAEMNV 180
  181 AGSWVQKNMG ITDSKELFIS DTLKGGDFKG DPEMVKTMVD NAVGAAEWLR DYVKVEFYPD 240
  241 QLFQFGGHSV KRALIPKGHT GAEVISKFSI KADEVGLPIH TNTKAEKLIQ DQTGRIVGVE 300
  301 AAHNGKTITY HAKRGVVIAT GGFSSNMEMR KKYNPELDER YGSTGHAGGT GDGIVMAEKI 360
  361 HAAAKNMGYI QSYPICSPTS GAIALIADSR FFGAVLINQK GERFVEELER RDVISHAILA 420
  421 QPGRYTYVLW NQDIENVAHT VEMHQGELKE FTKDGLMYKV DTLEEAAKVF NIPEDKLLST 480
  481 IKDVNHYAAT GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT RTRVLDEQGK 540
  541 VIPGLFAAGE VTGLTHGTNR LGGNAYTDII VYGRIAGQEA AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle