YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24350697, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLSQRKAM AQHAVANRKI SIRLACAAFC ISETCYRYRR VNDDENAEIA EFLVELTEKE  60
   61 SDWGFGQCFN YLRNVKGFAW NHKRVYRIYC ELALNLRIKP RRRLKRNAPE PLKEPTKANQ 120
  121 VWSIDFMHDQ LSDGRSYRLF NVIDDFKREG LAIEAGFSLP TMRVIRTLNQ LLEGRTKPIA 180
  181 IRCDNGPEFI SHEFTEWAKK HEIRIDYIQP GKPQQNAYIE RHNKTIRYSW VSKHLFDTLE 240
  241 EVQDYATKWL WFYNHERPHK ANGGKPPLMV A

Type	Start	End	Confidence
Signal Peptide	1	34	0.53
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	271	0.99