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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375348, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSYPRYLAV FLLIIGQSCL AFAEEQPQVG QLFKLFDSGE SMPRATIEQN IALLEKLISS  60
   61 DDIERIEKLN QIKCWNQASD TEEEIAKALN YAEQALSQIP STASTHFITD INLCRAWFLQ 120
  121 LTGDINGAME GYTKSVQSAY EHEDIKLIAD ARSLRGALYS YTGDFSEALD DLVTAQGLYE 180
  181 SLNLTGWANI NLTDIATSFR RYGDPESAIK YYKKLKELYL KNGNKEQVAN VMSEIGIALD 240
  241 EMGKHEQAIE HFRFSYQYFK DQKLNIVAAI NATNIAYSLI QLNRLDEAEN YLNEAAPDIS 300
  301 ENEPAAYSFM KLFMGKIRNQ QGRYQEALDE LSAAEHAFRV MHNDRGLIQL LQLKSDIYAA 360
  361 MEDLPQAYHI LQEFIALTKK VDDSSIAHQT TELKVKFDTS WIESENKRLI DNQKLKEQEL 420
  421 TLLEKNKSLQ LIILLLTGCI LATVSLFAYK QVHRNRQLQT IALTDYLTQL PNRRHIYAQA 480
  481 EQYFQLALKQ QIPFSIIIFD ADHFKKINDN FGHEIGDQAL LTIAEASKTL TTDRNLVGRI 540
  541 GGEEFLILLP NTDADRAWKL AHELQTLITR FGAINLPVEL KLTVSAGVAT LPIQSELQDQ 600
  601 NFARLLKRAD NALYEAKNAG RNCVKAAEIT G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle