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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24349772, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKKLTFCT LLALASTSIS SFGDDTELYV KESSTRTGAR PKVLVIFDNS GSMSTEEITQ  60
   61 VVDYDPDYDY PPLSGSGYSG DRIYYTVGGG ALPTPDTTSD RRYFNATING CNQSKVALDQ 120
  121 FGRFTGYIRE FTSSGTTGVW KEFPETDGRN IKVVDCWEDI STVDPQNSSP YSNGFPANGL 180
  181 TTGSGKNKKA FPYNTSSSPG TTWANALAAA KNTGFGVGQP VTFYTDNYLR WYWLSKEGRL 240
  241 PTIKVPRIDI AKKAISNIIR STPTVDFGLA VFNYNYPNEG NRDGGRIVSG ITQMTDTSRA 300
  301 SLLSTIDGLP AKTNTPLCET MYEAYRYFAG KGVVFGHADT DYGSYVGNRP PYDNSVETNG 360
  361 TYVSPFKVCT DIAYVIYVTD GSPTVDGSAN NNVKTLTAAA SKSGNYSSFS QGLSTPSYLP 420
  421 ALASYMFNND LINKPDSSNT EQMQNVRTYT IGFSKGADDA APLLAETAKR GGGLYFAAQN 480
  481 SLELQNALND ALSNILNIDS SFTSPSIASN NFDRTQTFDA AYYAMFLPGK GPRWSGNLKK 540
  541 LRVTADGTLV DGEGNAAIAD NGNIKETACT IWTDCTSQKD GNKVEVGGAA AQLRGQLNRT 600
  601 ILSNLAGTSS LSPLTLSNAQ NAAGGEQALA TFMRTDIDEV ANTLDWLKGI DVDDDNKNGS 660
  661 ITDKRNDVMG DPLHSKPLAL NFGSETATDI RIILGTNQGV LHMFKDAGES VSETWGFIPY 720
  721 ELLPNLIELR TNDPSGVHTV YGMDSSPVAY TETDSTGKVN KAWVFVGMQR GGSSYYALDV 780
  781 SNPDSPSLMW TINPSSDGFV DLGQTWSEPI VTKIVGYDKP VLIFGGGYDE SFDATPTTSP 840
  841 QGRAIYIVDA QKGTLIHSFG GSASGATVLP GIQGSIPNSV AVLDSNNDGY TDRIYASDVT 900
  901 GNIWRMDLPT ASSGTWTAFK FASLGGSNSD NRRFFAEPVV AQTMFTNLSE VSVTTGTETV 960
  961 TTKTHQNVPY DAVAVGSGMR SSPSSTNVND MFFMLQDRNV VTKSFTGSNV PATITINNLY1020
 1021 DVTSSAPTSE TDNINFGTKF GWFYDFSGLG EKSLTAALIV QGKVYFTSYS PPADSVADNV1080
 1081 CLVSGAGKLY AFDLHKGTRS FSQLYYELGE RVPDTPQIVI PAPETGKDPY IYIIGVGKGD1140
 1141 INENGEYSGT INVASGLGVN KIYYHIDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle