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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374418, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKRPNIEAQ APLTQWQKSL PFKLTLIQLL IASILIFSTA WVILNIQTQQ INEQQTLLNQ  60
   61 NHGQIIIAKL QEMTSQVENQ VNAISQIAML YRHEPEQLSK SIPELLSIES QKDIISGGGI 120
  121 WPEPGAFNRQ KFRDSLFWSH NIHGELVAID SYNDDNFPSY HTEEWYRPTR FFPAGKVFWS 180
  181 KSYVDLTTHE PMVTASSAMW MEHQFIGAAT TDISLEKLNQ LLRNAMLNVS GYVMALDHQN 240
  241 QILAFPNRDN TLQSHSDTTH NLISFDAFAQ TEQALTPIAS ALHLADRTFI EQAIAERVFT 300
  301 QEQMENLTRL SKDSERDMLS AIVNDNAKNH FSTPKRIALV SLAMDPILKG PSLVSVFLMP 360
  361 HTYWKILVVT PVAPLEDTAK KLIEKVGLSL VLIQMFGLIL LFILQHKLIM APIMEMVKAL 420
  421 KRNDSASIEL KAKERHDEVG LLAKTFLSRT QQLEIAMSSL DASNLALEQQ LLSQQHFQQE 480
  481 LNRHKEQLRS LLDYSSTIIY IKDLNGRYTL VNNKYCEVLG IERRKIIGAM DFELFQPPLA 540
  541 ELYQQNDQRA NNSHDALHFE EPIPTPRGEI IYHMTKFDIR DDEDNSIGVG AIGFNVDLKK 600
  601 RQEKEQEKLL QYQLNQLKDQ QHKTQLAQQE IAQLRAQLTD ANDEINLQTQ LNRNKQQSQK 660
  661 LMQHFLSDVM NQMMQEQDRL LAQVCQHKDA DQHTHVVQLM SQQAARLRQI SQLFTVQQSE 720
  721 IRPLHLAQFF QHLLSLLQPQ LLKAQVKVSL SCDEQLVIDG DAWQYLQFFY RLLNNTLQHA 780
  781 FKDHHQHREL LLQLKKQGHE LQLLVKDNGV GLSASKLEQL RHEMQQKQCT GTLSSLNLWI 840
  841 KDELKGELNI KSELNQGTRI ECHWPLSKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle