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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24348818, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTLVVAVI AICYVSLLFL LAWGAERWFS GVTKKLQVVI YGLSLAVYCS SWSFLGTVGQ  60
   61 SAKDFWSFIP IFVGPILIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAAIVT 120
  121 LIAMFGIMPY IALQLKAMVF SLNLFQPADD PLNGVTIALL ITALLAIFAI LFGTRKLDAT 180
  181 EHNPGMMLAI AFESLVKLAA FLLVGIVISF GVFDGFGDIW QQASDKSLIH HPNPRIETLM 240
  241 PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPLY LALFGLFVGP LALAGKLILG 300
  301 DSVAADTYVI NLPLALDHPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVVLRT 360
  361 GNIREKNFSQ FSQMLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA 420
  421 LVGGLYWKHG NRAGVFLGLS VGFSLWFYIM LSGMTGNQSP AALMSSNIDL LDAITPNVRD 480
  481 ALTALFANIA CYVLGSIWFR AGVAERIQAS AFVSPGKLKN NASKKSGPIS QQDLLILASR 540
  541 FVSPTRAYES FSRFSTEAVK SDSWHKAATP ELIAHTERLL AGVLGASSAS LVMDSVLQGR 600
  601 DLALDEVFSL VDEASSKIML SQDMLRGAIE HAYEGMSVID SDLNLVAWNY KYVELYQYPE 660
  661 GFLQQGMPIS EVIRFNAARG YCGSGAIEQQ VEKRVQHMRN GTPHTSERQR KDGKVIKIQG 720
  721 NPMPDGGFVM TFTDITQYRQ QERALLEANE TLESRVKERT FELAMLNSEL LEAKAQEEMA 780
  781 NASKSRFLAA VGHDLMQPLN AARLFTASLS QYPNLDREAR TTLSHVNSSL KTAGELLTDL 840
  841 LDISKLDSGM VDVNRRDFAI SELLNGLSVE FEAMAADNQI RFKMIPCSAT VNSDPSLLRR 900
  901 VLQNFLTNAY RYARGGRVLF GCRHRGSELE IQVLDTGCGI DEHETHEIFK EFKRLNNPRS 960
  961 KSVSGLGLGL AIADRISRVL NHGIQVSSQL GRGSVFSITV PLGETVRQPQ VKALPSLLQP1020
 1021 LSGIKVLCID NEEAILAGLE SLLSRWQCEV ICAKDLADAR IKLGLKGVAP DIVLADFHLD1080
 1081 DGQNGVDAMD GIRSLYGKDL PGILITANTR KELVEDVQRR GYHYMAKMIK PAALRALISS1140
 1141 LVKKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle