YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24348140, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLRGKGMA LTTRLPFVRF TALKCLGLII GLCCVLITAS FASPAPNIQL ATEYSLDNHS  60
   61 NNDAQISTFF VSEKLDGVRG YWDGQRLFTR QGNPILAPSW FTAEFPAIAM DGELWLGRGQ 120
  121 FEAISGLIRQ ASPKDADWQN VRFMVFDLPT TKGSFEERYH KMQALIAGKS VYLQVIEQFS 180
  181 VASVEALYQT LDTLVALGAE GLILHRRTAI YTPGRNPNVM KLKPYLDAEA TVIGYIAGKG 240
  241 QFSGKMGALR VQTPDGRIFN IGTGFNLAER QHPPAIGTLI TYKYLGLTVN GLPRFASYLR 300
  301 IRTDIDPKNK E

Type	Start	End	Confidence
Signal Peptide	1	42	0.82
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	311	0.99