YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24373127, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVFCKTLLA SALASATLAS AYAAEPLTVY GKLNVTAQSN DENGDATTTI QSNASRFGVK  60
   61 GDFELSSSLS AFYTVEYQVD TGAASSDNFT ARNQFVGLKG DFGSFSVGRN DTLLKISQGD 120
  121 VDQFNDLSGD LGKLFKGEVR AAQTATYLTP SFGDFVFGVT YVAEGNDVKS QFAQDGFSVA 180
  181 AMYGDAKLKK TAVYAALAYD SDVSGYEVLR ASLQAKLAGI KLGGMYQQQE QTYKLDKTTS 240
  241 LPVEVTAESA TGYLLSAAYD INAVTLKAQF QDMEDLGDSW SVGADYNLGK PTKVFAFYTN 300
  301 RSLEANTDDD KYIAIGLEHK F

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	321	0.99