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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346791, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM  60
   61 ADATYIEPIQ WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLAE FNVEMIGATA 120
  121 DAIDKAEDRS RFDKAMKSIG LECPRAGIAH SMEEAYGVLE QVGFPCIIRP SFTMGGSGGG 180
  181 IAYNKEEFEE ICSQGLDLSP TKELLIDESL IGWKEYEMEV VRDRNDNCII VCSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFGINP KDGRMVIIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP 360
  361 RFNFEKFAGS NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVNRHGLD PITDMSKPEA 420
  421 MARIRLELKE PGCDRIWYIA DAMRAGLTLD EIFRLTNIDP WFLVQIEELI KLEGQVAEAG 480
  481 LAGLNEELLR KLKRKGFADA RLAVVLGVNE SEVRKLRDRF DIHPVYKRVD TCAAEFATDT 540
  541 AYMYSTYEEE CEANPSNRDK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG 720
  721 GRAMEIVYDQ QDLLRYFNEA VSVSNASPVL LDHFLDDAIE VDIDAVCDGE TVVIGAIMEH 780
  781 IEQAGVHSGD SGCSLPPYTL SQEIQDRMRV QVGKLAMELG VVGLMNVQFA VKNNEIYMIE 840
  841 VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLKAQNFTQ EVIPPFYSVK EVVLPFNKFP 900
  901 GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA 960
  961 AKLIELGYQI DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ1020
 1021 AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHKR ILAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle