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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346031, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTDRFPESF GPPKSFFISV VRSSWLMLVA ALTFMGISWF VLQEYLRERG EERFNNNVQE  60
   61 LSEAVSRRMT AYEQVLRGGV GLFLSSRGVT RSEWQTYVAN ARLSDYYPGI QGLGFAELVT 120
  121 PATLDEFTQQ VQQEGFSDFR ITPIGDRELY CVIKYLEPFD WRNQRAFGFD MCSEATRRSA 180
  181 ILKAITSGLP KVSGKVTLVQ ETPENTQAGV LMYVPLYRGQ PMTEVERMQQ AIGVVYALFR 240
  241 MNDLMQGIMG KRFSGIKLAI YDGSEANRTH LMFSSDPKLP SSKDVFYQSQ LETMEGQVWR 300
  301 IDVSSESRFI SRAEQTRSVW LQVIGCAFIL ALFYAVISMA RNRYQESMLT AELIANEKRF 360
  361 RLIIEASPSA LFMVDKTGVI TLVNTQGERL FGYTREELLG RSINMLLPET LREIHQQHLS 420
  421 HYLVHPIAKN MSMRDDLLGC CKDGTPLAVE VGLTPVHFSN GIYILTTINN ISERKRIEAQ 480
  481 RIEHMAELER INQELDRFAY IASHDLKSPL RGIEQLTTWL SEDLVDNTNE NVQKYLGLIQ 540
  541 NRIQRMVRLL DGLLTFSRIG RVDNEMVEVD SRQLVEDMFA LVAPPQGFEL VLEGDFPHFK 600
  601 TVKTLLELVV RNLISNAIKH HDRGFGVLKV LCETKNTYYW FSVVDDGPGI SSEFQLKVFE 660
  661 MFQTLRPRDE VEGSGLGLSL VKKTVDSLGG KIQLESVGRG CCFRFSWPIH IVNKEGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle