YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SO0369
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFSALPIF VTVVECGSFS LAGQKLGLSK SAISKRISQL EQHLGIQLLQ RTTRSLSLTD  60
   61 AGARYFEYIR PAVQLTQEGL DAISELQQTP RGNLRISVPM VFGRLYIAPL IAEFLKRYPD 120
  121 IQLQMQMDDK ITDLIAGGFD LAIRIGELPD SSLIARKIAP CLSVICASPA YLTQHGLPMT 180
  181 PCELTQHNCL FYSYFQDGVE WSFHSPDGMQ RVQPKGNYQV NNSDAINQAC LDGLGIANLP 240
  241 RFIVEPDLQT GHLQALLTDY PLPEHGIYAV YPQRKYQPTK VTVLIEFLMA KLGQY

Type	Start	End	Confidence
Signal Peptide	1	22	0.57
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	295	0.94