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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLPD2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSVLSLSFS QASLPLANRT LCSSNAAPST PRNLRFCGLR REAFCFSPSK QLTSCRFHIQ  60
   61 SRRIEVSAAA SSSAGNGAPS KSFDYDLIII GAGVGGHGAA LHAVEKGLKT AIIEGDVVGG 120
  121 TCVNRGCVPS KALLAVSGRM RELQNEHHMK AFGLQVSAAG YDRQGVADHA SNLATKIRNN 180
  181 LTNSMKALGV DILTGFGAVL GPQKVKYGDN IITGKDIIIA TGSVPFVPKG IEVDGKTVIT 240
  241 SDHALKLESV PDWIAIVGSG YIGLEFSDVY TALGSEVTFI EALDQLMPGF DPEISKLAQR 300
  301 VLINTRKIDY HTGVFASKIT PAKDGKPVLI ELIDAKTKEP KDTLEVDAAL IATGRAPFTN 360
  361 GLGLENINVT TQRGFIPVDE RMRVIDGNGK LVPHLYCIGD ANGKLMLAHA ASAQGISVVE 420
  421 QVTGRDHVLN HLSIPAACFT HPEISMVGLT EPQAREKAEK EGFKVSIAKT SFKANTKALA 480
  481 ENEGEGLAKM IYRPDNGEIL GVHIFGLHAA DLIHEASNAI ALGTRIQDIK LAVHAHPTLS 540
  541 EVVDELFKAA KVDSPASVTA QSVKVTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle