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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23506111, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKETPASSS MPSGLKAYTV PIFLFVLAMF FQLFLLPRSF PPSHYDVLGV KMYSSVDDVK  60
   61 DAYQTVASKW DSGSGVSLPA DFVKIQYAYE LLTNLVWKRD YDLYAIDESV HIIEELEKQY 120
  121 AVEDFAKIKL PLLEVVSYEP EREGFMSITS QDFASKFQDS KPWLIQVYSS GSNSSAQFAT 180
  181 VWRRIVALLD GVANHAMLEL GDVQLVTYLA EKKPTGQVFF RKGLPSIFSF PPNCKTADCL 240
  241 IRFEGELSAD AITDWFATTV LGLPRVFYHT KETLVSKFLS KVPPNKVKVI LFSQTGERAT 300
  301 PIVRQAAKDY WNFASLSHVL WREEDASFWW NALEVESAPA IVIMKDPGSK PVVYHGSGNR 360
  361 TWFLDILEQN KQLLLPQLRS TTSMELGCDA RGYSRAGYDK VTWYCAILVG RQSVELNKMR 420
  421 ETMCRVQDAL SKYDDSDDAS KDPSITPAAS AHKSKRLSFA WLDGEAQNKY CFFYVQSETS 480
  481 YDTCGTRRAP IDVPRILIVR YHRNATETAN AEQKSSKWPK TVWQSEADDV DPAAQLVVSY 540
  541 DGTAEIPQII KWLSKMVDDG DNRNLPFYRA KTPELVPESA EPMRSGVPKT VKATQKLLSL 600
  601 WNRIKDYLAD PRMGPTLLLG ALLSAGNVWW MRSRSSTQQP AQTNQPSPNQ PADNVEEKKK 660
  661 KERKREQRRR NAKEEEVPAS ITDNEPKDAV QILSSGSDSD 

YRC Informatics Platform - Version 3.0
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