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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KAD5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLSLSSAH FSSTSSSSRS SISTSSLSPS STSLPLLQSP IRRRYRSLRR RLSFSVIPRR  60
   61 TSRSFSTSNS QIRCSINEPL KVMISGAPAS GKGTQCELIV HKFGLVHIST GDLLRAEVSS 120
  121 GTDIGKRAKE FMNSGSLVPD EIVIAMVAGR LSREDAKEHG WLLDGFPRSF AQAQSLDKLN 180
  181 VKPDIFILLD VPDEILIDRC VGRRLDPVTG KIYHIKNYPP ESDEIKARLV TRPDDTEEKV 240
  241 KARLQIYKQN SEAIISAYSD VMVKIDANRP KEVVFEETQT LLSQIQLKRM IKTDKASPVQ 300
  301 DKWRGIPTRL NNIPHSRDIR AYFYEDVLQA TIRSIKDGNT RLRVDINIPE LNPEMDVYRI 360
  361 GTLMELVQAL ALSFADDGKR VKVCVQGSMG EGALAGMPLQ LAGTRKILEY MDWGDDETLG 420
  421 TFVKLGAIGG KEVDEEDDMF ILVAPQNAVG NCIIDDLQAM TTAAGKRPVV LINPRLKDLP 480
  481 ASSGIMQTMG REQRLEYALT FDNCYVFRLL YYLGTQYPIM GALRMSYPYR YELYKRVNEE 540
  541 NGKEKYVLLA TYAERPTPEQ IDDAFSGKSR DQSKKASGIW GFLSSVFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle