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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EXEC1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLSTPPSQ NLAFSPAASA TSSRLTPSSK RSFYPHRLPD PTALCRCSSS SGSNSSSSSS  60
   61 SDDNPRWDSA IQDVLKSAIK RFDSVLSWYA TLDNDDGEQG SENVEKIDDD WDWDRWKKHF 120
  121 DQVDDQDRLL SVLKSQLNRA IKREDYEDAA RLKVAIAATA TNDAVGKVMS TFYRALLEER 180
  181 YKDAVYLRDK AGAGLVGWWS GISEDVKDPF GLIVQITAEH GRYVARSYNP RQLSTSAAGA 240
  241 PLFEIFLTLD GKGNYKKQAV YLKWKEIFPD VPTMPSRTLT PGRFLTSPGR KEDTGNLAVE 300
  301 SSEDEESDNS DDDSDLLEES SGFQSFLRDM IPGVKVKVMK VTAPGRVDKD FISKVIEQIA 360
  361 DEEDEENDLD IEDIDVEDDT KAEIDEKNAD IELESVTDEI IDNNGGREIA VKFVIGDIVD 420
  421 RLSGNQPLKE SLRSPANLES VENSSFYLRL EKDLNVKESK GVEGTTLVDG KGSRQSRRRI 480
  481 ENIMGDLAKS IEKEKKISVK MLKDVGELLS LTLSQAQNRQ QLSGLTKFRR IDVTPSLDPL 540
  541 DGLYIGAHGL YTSEVIHLKR KFGQWKGGKE SKKPTDIEFY EYVEAVKLTG DPYVPAGKVA 600
  601 FRAKIGRRYE LPHKGLIPEE FGVIARYKGQ GRLADPGFRN PRWVDGELVI LDGKYVKGGP 660
  661 VVGFVYWAPE YHFVMFFNRL RLQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle