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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42567493, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYGAPGMKA GRRVLTPLFV LVFLLQGVHS QTSRNKFNIA KAGHKLASPP VTLKKVGDNQ  60
   61 VVVDNGIIDV TFSSPQGLIT RIKYNGLNNV LNDQIENRGY WDVVWYKPGQ VSSTDYLVGT 120
  121 KFDIVNQTSE QIEISFSRTF SQRGSGIPLN VDKRYIIRRG VSGIYMYAVL ERLIGWPDVD 180
  181 MDQIRIVFKL NTTKFDFMAV SDNRQKIMPF DTDRDITKGR ASPLAYKEAV HLINPQNHML 240
  241 KGQVDDKYMY SVENKDNKVH GWISSDQRIG FWMITPSDEF HACGPIKQDL TSHVGPTTLS 300
  301 MFTSVHYAGK DMNTNYKSKE PWKKVFGPVF VYLNSASSRN LLWTDAKRQM VSEVQSWPYD 360
  361 FVKSVDYPLH HQRGTVKGQL FVIDRYIKNV TYLFGQFAFV GLALPGEAGS WQTENKGYQF 420
  421 WTRADKMGMF TIANVRPGTY SLYAWVSGFI GDYKYVRDIT ITPGREIDVG HIVYVPPRNG 480
  481 PTLWEIGQPD RTAAEFYIPD PDPTLFTKLY LNYSNPQDRF RQYGLWDRYS VLYPRNDLVF 540
  541 TAGVSDYKKD WFYAHVNRKA GNGTYKATTW QIKFNLKAVI QTRIYTLRIA LAAASTIDLL 600
  601 VWVNEVDSKP LFITGLIGRD NAIARHGIHG LYKLYNIDVH GKLLRVGNNT IFLTHGRNSD 660
  661 SFSGVMYDYL RLEGPSGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle