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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ths-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQLERLLF FIVVISGALC TVEDYVIMSQ CAHNKAIHIA AEGTVSVTDT SQIQNITIVG  60
   61 FPDYLNNEFK IALYAKETRR YLCFNDNWRL VGMRELRDTC YFNETIVHGY FVFRSVVDLQ 120
  121 RRVGFTHRGK PVGPKKSVND ACYMFNKIEA EQFFRHHHNN GNSGNNNGNG SGNDNGNGSN 180
  181 NSRKPPRNNK NNRHKSNNQN QKLQQQQEHH GHNNNNNNVI LNNSNTSLSS TNKKQLAINR 240
  241 QRQQQQQHQV RHHHNDPSLL LRRQQHEKKQ KRRKQQKQQQ HQQRVSASPT NPMPATPTAA 300
  301 PAATPTVAAT SPATATRSTT AAMSSKRKGR RRKAKVRPKA QQQQQLQLLA TAATSPYTDD 360
  361 TLYGSSSSSS STGFEDLDIY NSSSSSGSSS SLDPWSTWST IDSFSGSSTT ATSDDSISSS 420
  421 SSSNYDAWAT YITEMEAEAS AMTPEMGGND TELMQYEAEL VDDPEAESTA TIETKATSVT 480
  481 STIAATAATT TSTAGSQLVI EQTPLARSNI SNKSSSSTKA TPTATSQTET AQSTQQPSRH 540
  541 RSNSREDHLD NSDMLLAGEN EVKPQQPRKL LWTVQPPLAT RGSTLATLVA TPEQQHTSTT 600
  601 ATAATTPEQH VAPSLFSVDK NINSNLNNTL TEASPTATST SSITSATTMK RPIRKFTKKL 660
  661 MATPYHQLTY VRNAGGDIDI DNLDNISVYP VLYDGDLEGN GGGNSSDGGF SGFLPTSTTS 720
  721 HLTEPIRIGM NRIRPNKTLH WFTHQRFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle