YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CXG3_MOUSE
Organism: Mus musculus
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CXG3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|147898055, gi... - gi|208966330|dbj|BAG73179.1| gap junction protein, alpha 8, 50kDa [synthetic construct], gi|14892176...
HGNC:4281|MIM:60... - junction protein, alpha 8, 50kDa
GJA8 - gap junction protein, alpha 8, 50kDa
360.0 [0..13] [240..3]
gi|55588088 - gi|55588088|ref|XP_524857.1| PREDICTED: gap junction protein, alpha 8, 50kDa (connexin 50) [Pan trog...
359.0 [0..13] [240..3]
gi|109120162 - gi|109120162|ref|XP_001087205.1| PREDICTED: similar to gap junction protein, alpha 3, 46kDa (connexi...
358.0 [0..13] [255..3]
CXA8_RAT - Gap junction alpha-8 protein OS=Rattus norvegicus GN=Gja8 PE=1 SV=1
355.0 [0..13] [236..3]
CXA8_MOUSE - Gap junction alpha-8 protein OS=Mus musculus GN=Gja8 PE=1 SV=2
353.0 [0..13] [240..3]
CXA3_SHEEP - Gap junction alpha-3 protein OS=Ovis aries GN=GJA3 PE=2 SV=3
351.0 [0..13] [268..3]

Back

Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLELPIKC RMCGRFLRQL LAQESQHSTP VGRFLLPMLM GFRLLILVSS GPGVFGNDEN  60
   61 EFICHLGQPG CKTICYDVFR PLSPLRFWAF QVILMAVPSA IYVAFTLYHV IGYWEVPGKE 120
  121 NKEQETQISK GDHSKDVSGA KSLKLLWAYV AHLGVRLALE GAALGVQYNL YGFKMSSTFI 180
  181 CREDPC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGSTTCFQSH PSEKTIFLNI MFGISGACFL FIFLELALLG LGRFWRIYKH KLSFLKKLPT  60
   61 SESSVRSKDT TDELSVVEAK EPF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle