| Protein: | K1043_MOUSE, TTC... |
| Organism: | Mus musculus |
| Length: | 1691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for K1043_MOUSE, TTC....
| Description | E-value | Query Range |
Subject Range |
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1271.0 | [0..1] | [1691..879] |
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1267.0 | [0..1] | [1691..411] |
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1264.0 | [0..1] | [1691..766] |
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1263.0 | [0..1] | [1691..639] |
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1248.0 | [0..1] | [1691..888] |
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1219.0 | [0..1] | [1691..766] |
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1044.0 | [0..128] | [1691..1] |
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953.0 | [0..2] | [1691..538] |
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Region A: Residues: [1-418] |
1 11 21 31 41 51
| | | | | |
1 MVQKYDKALG YHTQELEVYQ ELSDLPGECR AHGHLAAVYM ALGKYTMAFK CYQEQLELGR 60
61 KLKEPSLEAQ VYGNMGITKM NMNVMEDAIG YFEQQLAMLQ QLSGNESVLD RGRAYGNLGD 120
121 CYEALGDYEE AIKYYEQYLS VAQSLNRMQD QAKAYRGLGN GHRATGSLQQ ALVCFEKRLV 180
181 VAHELGEASN KAQAYGELGS LHSQLGNYEQ AISCLERQLN IARDMKDRAL ESDAACGLGG 240
241 VYQQMGEYDT ALQYHQLDLQ IAEETDNPTC QGRAYGNLGL TYESLGTFER AVVYQEQHLS 300
301 IAAQMNDLVA KTVSYSSLGR THHALQNYSQ AVMYLQEGLR LAEQLGRRED EAKIRHGLGL 360
361 SLWASGNLEE AQHQLYRASA LFETIRHEAQ LSTDYKLSLF DLQTSSYQAL QRVLVSLG
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| Detection Method: |  |
| Confidence: | 78.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [419-675] |
1 11 21 31 41 51
| | | | | |
1 HHDEALAVAE RGRTRAFADL LVERQTGQQD SDPYSPITID QILEMVNAQR GLVLYYSLAA 60
61 GYLYSWLLAP GAGILKFHEH YLGDNSVESS SDFQAGSSAA LPVATNSTLE QHIASVREAL 120
121 GVESYYSRAC ASSETESEAG DIMEQQLEEM NKQLNSVTDP TGFLRMVRHN NLLHRSCQSM 180
181 TSLFSGTVSP SKDGTSSLPR RQNSLAKPPL RALYDLLIAP MEGGLMHSSG PVGRHRQLVL 240
241 VLEGELYFVP FALLKGS
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| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1ya0A |
| Description: | Crystal structure of the N-terminal domain of human SMG7 |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [676-788] |
1 11 21 31 41 51
| | | | | |
1 ASNEYLYERF TLIAVPAVRS LGPHSKCHLR KTPPTYSSST TMAAVIGNPK LPSAVMDRWL 60
61 WGPMPSAEEE AFMVSELLGC QPLVGSMATK ERVMSALTQA ECVHFATHVS WKL
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.448 | a.24.4 | Hemerythrin |
| View | Download | 0.408 | a.158.1 | F-box domain |
| View | Download | 0.408 | a.158.1 | F-box domain |
| View | Download | 0.374 | a.24.18 | Description not found. |
| View | Download | 0.369 | d.110.4 | SNARE-like |
| View | Download | 0.365 | a.74.1 | Cyclin-like |
| View | Download | 0.362 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.360 | a.118.9 | ENTH/VHS domain |
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Region A: Residues: [789-950] |
1 11 21 31 41 51
| | | | | |
1 SALVLTPNTE GNPAGSKSSF GHPYTIPESL RVQDDASDVE SISDCPPLRE LLLTAADLLD 60
61 LRLSVKLVVL SSSQEANGRV TADGLVALTR AFLAAGAQCV LVALWPVPVA ASKMFVHAFY 120
121 SSLLNGLKAS ASLGEAMKVV QSSKAFSHPS NWAGFTLIGS DV
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [951-1062] |
1 11 21 31 41 51
| | | | | |
1 KLNSPSSLIG QALTEILQHP ERARDALRVL LHLVEKSLQR IQNGQRNAMY TSQQSVENKV 60
61 GGIPGWQALL TAVGFRLDPA ASGLPAAVFF PTSDPGDRLQ QCSSTLQALL GL
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.739 | a.118.8 | TPR-like |
| View | Download | 0.700 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.700 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.653 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.613 | a.118.8 | TPR-like |
| View | Download | 0.596 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.596 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.586 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.574 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.558 | a.24.9 | alpha-catenin/vinculin |
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Region A: Residues: [1063-1691] |
1 11 21 31 41 51
| | | | | |
1 PNPALQALCK LITASETGEQ LISRAVKNMV GMLHQVLVQL QACEKEQDFA SAPIPVSLSV 60
61 QLWRLPGCHE FLAALGFDLC EVGQEEVILK TGKQASRRTT HFALQSLLSL FDSTELPKRL 120
121 SLDSSSSLES LASAQSVSNA LPLGYQHPPF SPTGADSIAS DAISVYSLSS IASSMSFVSK 180
181 PEGGLEGGGP RGRQDYDRSK STHPQRATLP RRQTSPQARR GASKEEEEYE GFSIISMEPL 240
241 ATYQGEGKTR FSPDPKQPCV KAPGGVRLSV SSKGSVSTPN SPVKMTLIPS PNSPFQKVGK 300
301 LASSDTGESD QSSTETDSTV KSQEESTPKL DPQELAQRIL EETKSHLLAV ERLQRSGGPA 360
361 GPDREDSVVA PSSTTVFRAS ETSAFSKPIL SHQRSQLSPL TVKPQPPARS SSLPKVSSPA 420
421 TSEVSGKDGL SPPGSSHPSP GRDTPVSPAD PPLFRLKYPS SPYSAHISKS PRNTSPACSA 480
481 PSPALSYSSA GSARSSPADA PDEKVQAVHS LKMLWQSTPQ PPRGPRKTCR GAPGTLTSKR 540
541 DVLSLLNLSP RHGKEEGGAD RLELKELSVQ RHDEVPPKVP TNGHWCTDTA TLTTAGGRST 600
601 TAAPRPLRLP LANGYKFLSP GRLFPSSKC
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| Detection Method: | |
| Confidence: | 6.221849 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
