YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG1732-PB
Organism: Drosophila melanogaster
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1732-PB.

Description E-value Query
Range
Subject
Range
gi|73988924 - gi|73988924|ref|XP_854917.1| PREDICTED: similar to Sodium- and chloride-dependent glycine transporte...
477.0 [0..12] [506..252]

Back

Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTNSASDGD GGGDVCKHES IEMSKELGHT TSLQSSSPTT TDTSNKQQLV KIEQLPDRGS  60
   61 WSSKMDFILS VVGLAIGLGN VWRFPYLCYK NGGGAFILPY IITLFLAGIP MFFMELALGQ 120
  121 MLTIGGLGVF KIAPIFKGIG YAAAVMSCWM NVYYIVILAW AVFYFFMSMR ADVPWRTCNN 180
  181 WWNTVNCVSQ YERKNLHCWD KIINGTTQKV CSVSALNITS LELTDPVKEF WERRALQISH 240
  241 GIEEIGNIRW ELAGTLLLVW ILCYFCIWKG VKWTGKVVYF TALFPYVLLT ILLVRGITLP 300
  301 GALEGIKFYI IPNFSKLTNS EVWIDAVTQI FFSYGLGLGT LVALGSYNKF TNNVYKDALI 360
  361 VCTVNSSTSM FAGFVIFSVI GFMAHEQQRP VADVAASGPG LAFLVYPSAV LQLPGSPMWS 420
  421 CLFFFMLLLI GLDSQFCTME GFITAIIDEW PQLLRKRKEI FIAIVCALSY LVGLTCITQL 480
  481 AAFAYCGSYS LNVFQYLGAM EWIDFMTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle