| Protein: | egr-PA |
| Organism: | Drosophila melanogaster |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egr-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
387.0 | [0..1] | [415..1] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MTAETLKPFI TPTSANDDGF PAKATSTATA QRRTRQLIPL VLGFIGLGLV VAILALTIWQ 60
61 TTRVSHLDKE LKSLKRVVDN LQQRLGI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-183] |
1 11 21 31 41 51
| | | | | |
1 NYLDEFDEFQ KEYENALIDY PKKVDGLTDE EDDDDGDGLD SIADDEDDDV SYSSVDDVGA 60
61 DYEDYTDMLN KLNNAHTGTT PTSETTAEGE GETDSA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-415] |
1 11 21 31 41 51
| | | | | |
1 SSASNDDNVF DDFTSYNAHK KKQERKSRSI ADVRNEEQNI QGNHTELQEK SSNEATSKES 60
61 PAPLHHRRRM HSRHRHLLVR KGESLLSARS EDSRPAAHFH LSSRRRHQGS MGYHGDMYIG 120
121 NDNERNSYQG HFQTRDGVLT VTNTGLYYVY AQICYNNSHD QNGFIVFQGD TPFLQCLNTV 180
181 PTNMPHKVHT CHTSGLIHLE RNERIHLKDI HNDRNAVLRE GNNRSYFGIF KV
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1osgA |
| Description: | Soluble part of TALL-1, sTALL-1 (BAFF) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.25413201891408 | bayes_pls_golite062009 |
| receptor binding | 1.87082918048468 | bayes_pls_golite062009 |
| binding | 1.55055236820725 | bayes_pls_golite062009 |
| tumor necrosis factor receptor superfamily binding | 1.47525106874221 | bayes_pls_golite062009 |
| CD40 receptor binding | 0.275062817872213 | bayes_pls_golite062009 |
