| Protein: | gi|45445606, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 992 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45445606, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
470.0 | [0..13] | [917..1166] |
|
Region A: Residues: [1-379] |
1 11 21 31 41 51
| | | | | |
1 MDPDNDIYAF YDIRGYKGKC RPGRPNSERI LQPRMSLLGK PLNYNRGTRR DVRYRRLQSR 60
61 LYNFLERPRG LHAIFYHVMV FLMVFTCLAL SVFSTIKEYE EDAVYILFRM EILVVIWFTM 120
121 EFGARLWSSG CRSRYQGCLG RLKFVKRPFC IIDIVTILAS IVVLGMGTSG QVFATSALRG 180
181 LRFFQILRMV RMDRRGGTWK LLGSVVYAHR QELITTMYIG FLGLIFASFL VYMWEKDVND 240
241 KFSNFAQALW WGITLCTVGY GDMVPITWQG KLIASCCALL GISFFALPAG ILGSGFALKV 300
301 QQQQRQKHMI RRRQPAATLI QAVWRCYAAD EHSVSVATWN IHRVALPSPP ASRASSSFKH 360
361 NTSFVARLPT IRRHKSQTI
|
| Detection Method: |  |
| Confidence: | 74.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [380-497] |
1 11 21 31 41 51
| | | | | |
1 QTPGGGDGGG VSKPPGSSRA STRYTRTIRD INASVENLEV VQNGKSMNPS FSEDSVAETT 60
61 CLKNIKNSDA SQPATLANCK LSSSAGSLAQ FPDRNRDRDQ DRRGHGEGEG DQAEEQAK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [498-688] |
1 11 21 31 41 51
| | | | | |
1 AGGSRRNLTI PVVLYGFLHG NFLGSTLSLR NPRVAPANDR DLEAGRDEDE VHKDTCQRSN 60
61 TLPLPVKPDS PSGSPGSGRT GRFFAAASHF LETGFSSPNP IIDVANEEDE PRCTQLTNRH 120
121 KTAIRFIRKL KYFVARRKFK EALKPYDVKD VMEQYAAGHV DLLGRVKMLH LRLDQILGKQ 180
181 GSKAKDVYAS K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [689-755] |
1 11 21 31 41 51
| | | | | |
1 ISLASRVVKV ERQVADIEEK LDILIKAYME DRDRFLALPL PAKPKIHSIS PSHKPLHHAH 60
61 NLAMIDV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [756-992] |
1 11 21 31 41 51
| | | | | |
1 WKRTAALSVH PEQVTTTPLL NPSAPDSSEL RSLTATQTPT TTTDAIATQT PMPPHVQHTA 60
61 TNTKSSVLNS YQLGSEKQQH NDVFMTELEN RTKKRVTLSL HRSTSEPYSK QEQRITIPDE 120
121 GADSLDSSAK PTPPDSSIIL IDEYEDFEEE DLNCEGEMDH FPTWEIDSDI GVEVDVDADA 180
181 DGDCDESTED TALLQCATRT AIVITPISPV SSAHNLQQLN DQTTTLNKSN LLPPDSG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
