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View Structure Prediction Details

Protein: Obp50a-PB
Organism: Drosophila melanogaster
Length: 200 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp50a-PB.

Description E-value Query
Range
Subject
Range
Obp50a-PA - The gene Odorant-binding protein 50a is referred to in FlyBase by the symbol Dmel\Obp50a (CG30067, F...
166.0 [0..1] [200..1]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTGRILVAL IFLGLIIPFR AAKCRAAPKS VQNVHVCCSA PLPNWGVFNR ECHKSAIQAS  60
   61 VSINRISKSK VNLANFLIKC RLDCDFNASS VLQGNRLIQA KVRPMLERAF SNEPTIDAYE 120
  121 SNFAKCSTVV RSKYQELSPL SRQSDACDRH ALFYSLCAYA RLIFTCPDKM WQRNNRMCQE 180
  181 AKAYAKKCPW PALKMFMRNT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1tujA
Description: Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-d4 propionate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle