| Protein: | Fs-PA |
| Organism: | Drosophila melanogaster |
| Length: | 767 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fs-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..5] | [764..182] |
|
Region A: Residues: [1-219] |
1 11 21 31 41 51
| | | | | |
1 MPHHHHQHQP TSSQNNLTFL KSNYKFKRRA MSMAIRALPA TTTPAEARRA EPSQNTDQLA 60
61 ATMSKTSAAT ATQLARATSR ECRTILGLFI VSAWSALQEL ANCLRQDEDR YVGHGRDVNA 120
121 SSDASDEVSM AREQQQHQRQ HSKHSASSSP AKSMRCTRAK AASASTGTAA ATATLGAAAA 180
181 EGATSGHQLG GQPLMALLIG LLLLNFRLAA AGTCWQTHL
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 2p6aD |
| Description: | No description for 2p6aD was found. |
|
Region A: Residues: [220-341] |
1 11 21 31 41 51
| | | | | |
1 GSGKCGQVFS TDISRSECCG SSQSFSYTDR ELSSVEYFFA TAIGGGVECS PCMESCKGFK 60
61 CGPNKKCVKR KGRPKCVCAP ECGAALRRRT HQQELELEQE PELEEEQQEM KPPRESRSLS 120
121 SE
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-700] |
1 11 21 31 41 51
| | | | | |
1 NTNFNLGLDG GQRQRADNQR KLQPRESKHR RLLIIDSSSR SSSNLPDQPT SGRRGRVEMT 60
61 GYERRRHRNN HGKHLTRSMT TGANDSFPAD KTPAQSPAAD SILAQSRLAN LANANEPAND 120
121 INRQSSTRVR HQHARRIEHA PNPDNGLRKR QHKQQQQHQH QHQDRMNTEA QSANTTVSGS 180
181 GSGATNHRRI SQLQHGSETA ASSDLANTHD LAHLGGIYAP LPPQHSNPVC GTDGRTYNTE 240
241 CQLRKRACRT NNAQLEVAYR GHCKNSCSGV HCLNGLTCVE DQYLMPHCIA CRIECPWDNL 300
301 DVDSSGYDER QAVCGVDGKT YRSACDINRM ICKIGRSIAV AYPGPCRAGR VSCADIKCG
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [701-767] |
1 11 21 31 41 51
| | | | | |
1 PKDNCLVDLQ TRQPRCVTCR YKCPRKQQRP VHKICGYNNQ TYNSWCEMHK HSCESRYFIG 60
61 VKSQGSC
|
| Detection Method: | |
| Confidence: | 2.02 |
| Match: | 2p6aD |
| Description: | No description for 2p6aD was found. |
