| Protein: | Dg-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1179 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dg-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..489] | [1179..224] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MRFQWFLSAS ASLSLFLLLD FVVWIHGERD FNVNDSQVPV IEPKDVPAYK QDPYVTELMS 60
61 CQNTPSEIVL SLLLKKHDWS ELTATKRAHV QAKLAKFFAI PKEFISLDSV SKRELRSMHK 120
121 LAMRKGGKGN KNIETLNRRL GRASFMIGCG PSYFVMGEPI AKQIAHQMKD GTIGALTEEN 180
181 FGLWFIWRKE L
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1u2cA |
| Description: | Crystal Structure of a-dystroglycan |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.57458227033664 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.20941485091826 | bayes_pls_golite062009 |
| protein binding | 1.02797373424802 | bayes_pls_golite062009 |
| transporter activity | 0.851228093937992 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.677581850277121 | bayes_pls_golite062009 |
| receptor activity | 0.505108400296655 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.483421965826537 | bayes_pls_golite062009 |
| signal transducer activity | 0.375469021130852 | bayes_pls_golite062009 |
| molecular transducer activity | 0.375469021130852 | bayes_pls_golite062009 |
| protein phosphatase binding | 0.13438543889553 | bayes_pls_golite062009 |
| phosphatase binding | 0.0613766967405507 | bayes_pls_golite062009 |
|
Region A: Residues: [192-616] |
1 11 21 31 41 51
| | | | | |
1 KSRSNRKRRQ SEGSGADEDD YDYGDDDEEV AEPSTEVPPV TTHAHRHHHG ALEVSEKIVS 60
61 PESVSSSAVP LVPDVEEEIE ESVSKLESVI SKTIENTKNI KELPVLGEAD DGEDEEEVEL 120
121 QQLGVPLAAE IVPDETTSAA ATRATEMVKP VDLDEQEISV DSGAVPAIDV EASATPTPSM 180
181 SARETQKPFS PYDATSSVSS SFSPVASIAS GSEAGEDSTS VSTPHLSPAN SPTVMPTELD 240
241 RNGLATTSSS SSSSASPPPS SSVPTQATQP TTSASSFSSS SSTTTTSTTA TVSTTTTASS 300
301 TATTTTTTTT LSESPKEGGE PDAISSGNNS LANNELSTPA TPTSSVATTT ASTPESSSIS 360
361 SNFVSTDYME PQPEENSPPI IKTRLQKLAV TSGKAFTFHV LPETFYDAED QGNLRLALTD 420
421 KDGHE
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [617-780] |
1 11 21 31 41 51
| | | | | |
1 LKANSWLQFN ADKRELYGLP LDDTVSRWQY RLSATDSGNA SVTETVEISV QQHRAVRTIN 60
61 HEISVFVRIN EKPGHNIDWQ LKLINAVART LDDSTNSAVV VREIRQTPHD PHSATFVYFN 120
121 ETLPTSECPE KELKDIIARL DANRLSDLVQ PQLGIKSITG QLIG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [781-1025] |
1 11 21 31 41 51
| | | | | |
1 SCQKDLTQVK PTQHMTKNVP PMPRNQVDRV NASLGQLLVY KVPADTFYDA NDNQLTLTLK 60
61 TRDHLELSPR HWLQFDSKNE EFYGIPKSGD IGSEEYLLVA EDSGGLSAHD ALVVVVSPAP 120
121 KRDFGFFFKA YLSIKHERFN ADLQRKFVER VAKLNGDPTT GQIQIRSITT HHDSDGTIVN 180
181 FYNTTLYRKH NSCREKEVAM TRSVYLNSDL SLREAAKRAL GPELNLTNFS VVPFSICHHT 240
241 ENIDT
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 1u2cA |
| Description: | Crystal Structure of a-dystroglycan |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.69328197643368 | bayes_pls_golite062009 |
| protein binding | 1.14884080540918 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.871842993993459 | bayes_pls_golite062009 |
| transporter activity | 0.863724831300677 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.688682339597643 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.491786688714933 | bayes_pls_golite062009 |
| receptor activity | 0.427379376489256 | bayes_pls_golite062009 |
| signal transducer activity | 0.352492495963483 | bayes_pls_golite062009 |
| molecular transducer activity | 0.352492495963483 | bayes_pls_golite062009 |
|
Region A: Residues: [1026-1085] |
1 11 21 31 41 51
| | | | | |
1 NQLDYIPSRP EEPTHKSSFG EDYMITFVWP IVIIVAMLVA ASIIACCLHW CRQRSGKMEL 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1086-1179] |
1 11 21 31 41 51
| | | | | |
1 GDEEERKSFR AKGIPVIFQD EYEEKPEIGN KSPVILKDEK PPLLPPSYNT SNMNGDNDVD 60
61 DYVPPPSVVV GGREVRGKSP ATPSYRKPPP YVSP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
