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View Structure Prediction Details

Protein: CG6262-PB
Organism: Drosophila melanogaster
Length: 867 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6262-PB.

Description E-value Query
Range
Subject
Range
gi|33589644 - gi|33589644|gb|AAQ22588.1| AT28434p [Drosophila melanogaster]
703.0 [0..1] [867..176]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQTARGMID NYLELVQQYG FVPGCGRIYC SGRSNPPLLI MMVKAYVEVT KDEQYAIEAL  60
   61 PLLETEYDTF ISKHSVQVKG RTMYQYRDSS AGPRPEAYRE DLECVASIKS PVVREVMYTE 120
  121 LKSAAESGTN FSSRWYVTVD GSNKGSFRDI KTSAIVPVEL NCIVFRSGKI LAEFNRKAGN 180
  181 TKKADEYQDR ACVLVKAIRD NLWNAQAGIW LDYDLVNNKP RNYFCCTNFA PLWARAFPLV 240
  241 DTEKVSKGVM QYIKTNDLDA QYGGVPYTMN KESGQNWDHP NVFPPMMFLI IEGLENLGTP 300
  301 PAKAMSKRWA HRWVKSNYAA YKYESFMFEK YYCEDFGTSG GSSPENTPLG YGWTNGVIIE 360
  361 FLCKYGKEIS LADTSDEGSK SKSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.632799902740898 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [385-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSKPSGKYQY IITSEANMDD QPSKKRCVCG APSMVGTMSH KSTATTATSD FAQQTQPPCS  60
   61 CGIAQKQRSQ TQPGEDGKCS CGAGAKEKSQ QQLQPKDAPS CGICGSQKQQ PSQAQMQRSQ 120
  121 QKVDDDQCTC SRKEALQQSQ SQQQRTLGIQ HDPDCPC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [542-777]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGPQQKGAGL IVVQGQVPDT DPDCECSMDE RQKQQMEQQQ KQQDCMRQQQ QQQQEHQKQQ  60
   61 QQLQSEQQQD CTTKPQTQDC SQHLKKSNGG CGCQDDEDED RHDALTGHYF PVADKDPDDV 120
  121 YQQESKSTQR ESGCDGCGRD DCPDPPQEDC GCSPVAKPQQ TPIAECAPQP KAPQPAPADD 180
  181 CSCAVGKSQS KAASVVPPPT FICPHCGGVT SEAFLSTHTI GTNRTMGPQD DCGAAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [778-867]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPLRGLASKG IQSGHSKVVA GGAGAECAPC KAHVTADFPA GHGPKPLFNK QFPLADPASN  60
   61 FDACPPKRGS DPTNNKKKKC CNCDEKEDGE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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