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View Structure Prediction Details

Protein: CG1815-PA
Organism: Drosophila melanogaster
Length: 1674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1815-PA.

Description E-value Query
Range
Subject
Range
CG1815-PC - This gene is referred to in FlyBase by the symbol Dmel\CG1815 (CG1815, FBgn0039863). It is a protein...
793.0 [0..11] [1674..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHFQSFAQS MESTDSSDSS GDSLKSIPRP DFEALSAIGS PQPQLQSSSL DGHVEMEPVI  60
   61 MPSKRQKYIV SAPPGSANCS SNSSSSSPSN INVGSSLTMK LTKVQPQQHQ AKSSTPNNKG 120
  121 KVAKEMVALQ RSHIESEVLS NFVTGVSKLK SRKSRYVPGN LATQAVGGEL SRSLNTSSEN 180
  181 ENKSLKVALK RSSSIPAPIL DSDDDWQDED IAWGVTTCRP RGRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEDGERLA NLNAEDRNIV PAYSMATRCR SRSKTLSLSN SWSNDDKGPR RSNLRSENEE  60
   61 FAKKHNAFLD RIIHDDRESE LALNTSGEGE SSLFSDASDT KTTTAKTPEE EAAERL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [341-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALIYEEPPTP GWDPFCWKCR GCGKLMPCSK CLRSFHSYCV RPATTKFDSS WKCPECQVIE  60
   61 AAPKRLRRNG VSVDLLSQLL SFALDRMKHV RGAHKLRSPL EVFPLTYKKF FVNPVSFESL 120
  121 AQCIRNGAYQ STDEFLSEVK WIQHNALILD AGDAKVEQAS KAVVKVCRQE ANEIDTCPEC 180
  181 YLNAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.39794
Match: 2f6jA
Description: No description for 2f6jA was found.

Predicted Domain #4
Region A:
Residues: [526-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSDEWFVKVC RHPHLLLWAK LKGFPYWPAK AMGSSNSTLV NVRFFGKHDR AFVPVKDCFL  60
   61 YSAQNPNTQT SRRSARDLAE CIREVEIHID HIKRKIGAFN YAPYRTPYDP LEEQQQLEQM 120
  121 MPGVYAAIDR ELEPANKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.221849
Match: 2nluA
Description: No description for 2nluA was found.

Predicted Domain #5
Region A:
Residues: [664-769]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLQFLIRKTA DDKLSIVKKT KATESGNESD QSPSPTKKLS EVDVVSVTGS GCSDHSNVKS  60
   61 NNYEVISRSG ESLTDSRCKV LLKRKSLAAK IVAESVETSE AVAPKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [770-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHSLSDASFT SESSEHKRKS KHARKQHDNQ DNQIEEAEKT GQEPPKSPTI SKQNENLRDE  60
   61 ENVIENAAND TSSASPVSAS VVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [853-989]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVELVRRRQG VTITKIPREQ QQTAEDTAAV PIPLPTAPPP KQNIPKGNEA ANPKQSDVER  60
   61 QQEQLIKKVI PFIEIKTEVM SEPDDEGIEE ASPANQPQTD QVPLQQETIT AQPESQMPAA 120
  121 APAPQPKPVD NAPFEEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [990-1152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIKEEILSED EMETEQSIVS RRLKSVPPMP LPMPPPPPLP PREESPATAD SVRFVGDTTI  60
   61 QRVSQKQGGK STDTGGKRKG VQQVPIAGIP QAPSPTHSPL LSTAPSPSAS PKPTSTLAVS 120
  121 KPPPPPPPKG KSASHLQFRG KNDRIPTSPP ATAPPATNTS SLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1153-1305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSNMVVIPVE QGGSCNAHSP MTIPVPPLRA VSKNTLQNTS TGSTSSCVPS SVSMPPPLAG  60
   61 LSIPPVATPT SQEESITNSG QPVGLLASAL NGTANDVLSS DSIPNDPITP GLATALSEML 120
  121 LHTGVPKLIA RPRGALRSDG SQIYPSQAGP VSQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1306-1376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLKENAHKIT DYFISVIEDT LSDMATGDQS VLQARIAGLS LENERLKQHY DRQINDLHRT  60
   61 SELMISEMRK T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1377-1493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEQEHKRVIS ELRQQNAIEL MRAVEEAKRK QWCANCMREA QLYCCWNTSY CDYPCQQLHW  60
   61 PGHSATCGQS VPPTIPVPPS VPTPIIEPGR AKAKVATPTA TPSITNPSPS SQIMRTV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.79
Match: 2oddA
Description: No description for 2oddA was found.

Predicted Domain #12
Region A:
Residues: [1494-1674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AACPSAPPSA NASSSKKWPP MMTLMNQSNQ EAMLKLPATT YLRPVVSTTM TAPVTAPQPA  60
   61 NNNSTNVIMA PTPPPGNNLA TIISAQRNPP NYNAKHPNPA MPVQRFNIPL PITVNSNAPF 120
  121 MMAEQHQKQV PKATGRSGKN NSRMRQTYSN NINNSNPQGM RCNNNPQAIR QNQMNQQVFQ 180
  181 P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle