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View Structure Prediction Details

Protein: CG1815-PA
Organism: Drosophila melanogaster
Length: 1674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1815-PA.

Description E-value Query
Range
Subject
Range
CG1815-PC - This gene is referred to in FlyBase by the symbol Dmel\CG1815 (CG1815, FBgn0039863). It is a protein...
793.0 [0..11] [1674..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHFQSFAQS MESTDSSDSS GDSLKSIPRP DFEALSAIGS PQPQLQSSSL DGHVEMEPVI  60
   61 MPSKRQKYIV SAPPGSANCS SNSSSSSPSN INVGSSLTMK LTKVQPQQHQ AKSSTPNNKG 120
  121 KVAKEMVALQ RSHIESEVLS NFVTGVSKLK SRKSRYVPGN LATQAVGGEL SRSLNTSSEN 180
  181 ENKSLKVALK RSSSIPAPIL DSDDDWQDED IAWGVTTCRP RGRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEDGERLA NLNAEDRNIV PAYSMATRCR SRSKTLSLSN SWSNDDKGPR RSNLRSENEE  60
   61 FAKKHNAFLD RIIHDDRESE LALNTSGEGE SSLFSDASDT KTTTAKTPEE EAAERL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [341-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALIYEEPPTP GWDPFCWKCR GCGKLMPCSK CLRSFHSYCV RPATTKFDSS WKCPECQVIE  60
   61 AAPKRLRRNG VSVDLLSQLL SFALDRMKHV RGAHKLRSPL EVFPLTYKKF FVNPVSFESL 120
  121 AQCIRNGAYQ STDEFLSEVK WIQHNALILD AGDAKVEQAS KAVVKVCRQE ANEIDTCPEC 180
  181 YLNAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.39794
Match: 2f6jA
Description: No description for 2f6jA was found.

Predicted Domain #4
Region A:
Residues: [526-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSDEWFVKVC RHPHLLLWAK LKGFPYWPAK AMGSSNSTLV NVRFFGKHDR AFVPVKDCFL  60
   61 YSAQNPNTQT SRRSARDLAE CIREVEIHID HIKRKIGAFN YAPYRTPYDP LEEQQQLEQM 120
  121 MPGVYAAIDR ELEPANKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.221849
Match: 2nluA
Description: No description for 2nluA was found.

Predicted Domain #5
Region A:
Residues: [664-769]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLQFLIRKTA DDKLSIVKKT KATESGNESD QSPSPTKKLS EVDVVSVTGS GCSDHSNVKS  60
   61 NNYEVISRSG ESLTDSRCKV LLKRKSLAAK IVAESVETSE AVAPKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [770-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHSLSDASFT SESSEHKRKS KHARKQHDNQ DNQIEEAEKT GQEPPKSPTI SKQNENLRDE  60
   61 ENVIENAAND TSSASPVSAS VVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [853-989]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVELVRRRQG VTITKIPREQ QQTAEDTAAV PIPLPTAPPP KQNIPKGNEA ANPKQSDVER  60
   61 QQEQLIKKVI PFIEIKTEVM SEPDDEGIEE ASPANQPQTD QVPLQQETIT AQPESQMPAA 120
  121 APAPQPKPVD NAPFEEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [990-1152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIKEEILSED EMETEQSIVS RRLKSVPPMP LPMPPPPPLP PREESPATAD SVRFVGDTTI  60
   61 QRVSQKQGGK STDTGGKRKG VQQVPIAGIP QAPSPTHSPL LSTAPSPSAS PKPTSTLAVS 120
  121 KPPPPPPPKG KSASHLQFRG KNDRIPTSPP ATAPPATNTS SLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1153-1305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSNMVVIPVE QGGSCNAHSP MTIPVPPLRA VSKNTLQNTS TGSTSSCVPS SVSMPPPLAG  60
   61 LSIPPVATPT SQEESITNSG QPVGLLASAL NGTANDVLSS DSIPNDPITP GLATALSEML 120
  121 LHTGVPKLIA RPRGALRSDG SQIYPSQAGP VSQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1306-1376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLKENAHKIT DYFISVIEDT LSDMATGDQS VLQARIAGLS LENERLKQHY DRQINDLHRT  60
   61 SELMISEMRK T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1377-1493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEQEHKRVIS ELRQQNAIEL MRAVEEAKRK QWCANCMREA QLYCCWNTSY CDYPCQQLHW  60
   61 PGHSATCGQS VPPTIPVPPS VPTPIIEPGR AKAKVATPTA TPSITNPSPS SQIMRTV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.79
Match: 2oddA
Description: No description for 2oddA was found.

Predicted Domain #12
Region A:
Residues: [1494-1674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AACPSAPPSA NASSSKKWPP MMTLMNQSNQ EAMLKLPATT YLRPVVSTTM TAPVTAPQPA  60
   61 NNNSTNVIMA PTPPPGNNLA TIISAQRNPP NYNAKHPNPA MPVQRFNIPL PITVNSNAPF 120
  121 MMAEQHQKQV PKATGRSGKN NSRMRQTYSN NINNSNPQGM RCNNNPQAIR QNQMNQQVFQ 180
  181 P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle