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View Structure Prediction Details

Protein: CG4836-PC
Organism: Drosophila melanogaster
Length: 1217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4836-PC.

Description E-value Query
Range
Subject
Range
CG4836-PB - This gene is referred to in FlyBase by the symbol Dmel\CG4836 (CG4836, FBgn0038762). It is a protein...
773.0 [0..1] [1217..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFGRVTNI LQISRCVSYH APLYRPRSLL HAERLRQLCT SASSGSKSSR RTNHPCRVRV  60
   61 QRYSQKGSNV FSVSDNVDML RKRISFSGNS SNAPKIMPIG LITPETGDGK DLKIVIVPLD 120
  121 LS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMDGNELKDT LETINKLRLY ANHIETFSNS MVEEYGALNE ALQEVESGGQ PQEVKAGASA  60
   61 EDRKFWEAFP STPTADAVGT ALDAGQGANM PMQRQTAVNS CLQNAVGNSA INSALKTTKS 120
  121 MSAMAQTEPI HGSTKASNLQ ELANQESDFV EEVRVDVPQD LSNRLNDMAV SSMELSFEMD 180
  181 MTNLRQALES KDK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [316-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAVTPQDPMI CMHTKVELDA PGTVEKTLPL RFNALISGVV EIDTQKLSPA QITEDKMPGF  60
   61 NDDLTSLAAN LCSTALEKGF AGKSSDTYIA DLELTKDEET IPNRIIDTSH MSAANQVGQV 120
  121 RESLQKIAEE AC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [448-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AMPGIQEQEV PVPVDKDGCK HPPVKPKRKC PGKCPLITDP CKEDPCERPA KKKAPKKKAL  60
   61 KTTEITCKGK GGGKSACGKD KKKDPCGKKD TKKKDPCAKF KSGEKKDPCA KKKDPCAKKK 120
  121 ADPCAKKKAD PCAKKKKDPC AKKKADPCAK KKKDPCAKKK ADPCAKKKKD PCAKKKADPC 180
  181 AKKKSSCAKK DDKKKDPCAK FKKG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [652-866]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSGGKSKCKF STVANLPDAS RRHLSTALSQ AFRESNSVSN GPRFKVYSTL VRRHYRVPVP  60
   61 KIESSCQCSL CTSRLLHKAV APARFTINTA LMRRRFGGLA GRISGGALQH ISYRGYAKKS 120
  121 KSGGKCGELQ TKYPINRGKD IKERTGLRED CFSDEDSCPK KSCTGKCAKV KFPKKKCDRK 180
  181 KKKDDRIGNL LTRSSIAQLQ PQRRSFSTRP CCHPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [867-1217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEKRTADDEA LTLRITNPYE ISVVPFSKPR PKDFDVLIRT GSVAVSNSDI HVYENGNRDM  60
   61 EAMSLGHDAT GIVEELGRCV QHLHVGDRVV MESALSCGIC DLCKKGLYNM CSGLVYNGFL 120
  121 STYQTHPADL CHRLPESISM EAGALTQTLA LGCQACFKAN VTPTSNVLIL GACPTAVAAG 180
  181 ICAKAIGAKR VAIAGCMAPA LDVVARDFGF QAVEFDSNAL FGEVLEAIYS KFRDWPDCVI 240
  241 NCSISAMTMN LAVMALQPCG VCVLAECDSE CASFNALDVL MKNIRLVPSF RSANMYPTAL 300
  301 QLMQSGRAHM QKFITATYPL SKADEAFRAA QHESNIGLGK VIVNCAEEVD V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1e3jA
Description: Ketose reductase (sorbitol dehydrogenase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-iditol 2-dehydrogenase activity 3.00103406168296 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 2.94416173750168 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 2.26153457113968 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity 1.69771604880532 bayes_pls_golite062009
chaperone binding 0.484522928331397 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
NAD or NADH binding 0.39817482511246 bayes_pls_golite062009
L-arabinitol 2-dehydrogenase activity 0.382131941157781 bayes_pls_golite062009
coenzyme binding 0.35922330382799 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle