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View Structure Prediction Details

Protein: gi|45553341, gi|...
Organism: Drosophila melanogaster
Length: 1477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45553341, gi|....

Description E-value Query
Range
Subject
Range
gi|28571658, gi|... - gi|28571658|ref|NP_731647.2| CG31368, isoform A [Drosophila melanogaster], gi|28381261|gb|AAF54713.3...
1422.0 [0..1] [1477..1]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRSQTRAE QAVPPAKTTK ENSGSLTVSQ LSSDVIWQLA SQYWTPDTKA DHLPYSAKII  60
   61 ERIYNEEIGD GGGHSARRIN MLEFSQYLEQ YLWPHYQRET ATHAHLMSIV IMANEKFRER 120
  121 VEVWTVFEKL PDQYPAFFRH VLESCLPSKK AKEASSTLRE RTALLMFINH CFNSMEIELC 180
  181 REQAKRLVSL SMWHCLQPRR REQELREVPE WRKYWKRLLK KEKDSKPEVL WERHFMQNLI 240
  241 IDFLHILESI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [251-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAEGEVPRNV VHYCERFLEF IIDLEALLPT RRFFNTVLDD CHLIVRALLS PLVRREEGKL  60
   61 FGQFYTRFEI NDVTGSSLTD HDMTQLHYKK ITSLQRAVFA KFPSLRVFAL SNVATVDNRE 120
  121 SLEQHFGGLD GKGLLQIATF LNLVPEEVVS PLDWHRVDEQ FLRELLITRH ERRCSQLEAL 180
  181 NEMPLYPTEQ IIWDENVVPS EYYSGDSCLA LPKLNLQFLT LHDYLLRNFN LFRLESTYEI 240
  241 RQDIEDAVSR MLPWKSEDGD VVFGGWARMA LPIASFAVVE VAKPHL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [537-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEKKPSRVRA DVGVTLSVRR EIKAEWENLR KHDVCFLITV KPTQPYGTKY KHREPFVPQV  60
   61 GLVSVRGCEV EGMLDANGRV IEDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 2iykA
Description: No description for 2iykA was found.

Predicted Domain #4
Region A:
Residues: [621-691]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEPRPQLQGE NRCYRVWLDS NQYRLDMDDL QEGADDVYES FNILMRRKPK ENNFKAVLET  60
   61 IRHLMNTECV V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [692-803]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPWLHDILLG YGDPGAAHYS NMPNQERSLE FNDTFMDYNH LEASFPQYNL KCEVPVENRQ  60
   61 PPFRLIFEDV PIQKESDGED PEEKPEEKLT KSILVQPYKY EARGPYPSDK PK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.30103
Match: 2gjkA
Description: No description for 2gjkA was found.

Predicted Domain #6
Region A:
Residues: [804-1477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNSIRFTPTQ VEAIRAGMQP GLTLVVGPPG TGKTDVAVQI ISNIYHNHPN QRTLIVTHSN  60
   61 QALNQLFEKI MALDIDERHL LRLGHGEEAL ETEKDYSRYG RVNYVLAKRM DLLSQVQKLQ 120
  121 EALGVSGDNA YTCETAGYFY LYNVMARWEK FQSQISVHKG EADAEKLRAE FEKEFPFGKF 180
  181 FADAPQPLFK GANYDELMDI ACSNFRYISD IFNELEEFRA FELLRTGLDR SKYLLVKEAK 240
  241 IIAMTCTHAA LKRKELVNLG FRYDNILMEE SAQILEIETF IPLLLQNPLD GLNRLKRWIM 300
  301 IGDHHQLPPV IKNMAFQKYS NMEQSLFTRL VRLGVPTVDL DGQGRARASI CSLYKWRYKK 360
  361 LEDLQHIFER DEYKQANPGF VHDYQLINVE DFKGVGESEP NPYFYQNLAE AEYIVAVYMY 420
  421 MRLLGYPAAK ISILTTYNGQ KHLIRDVINA RCGNNPLIGW PHKITTVDKY QGQQNDYILI 480
  481 SLVRTKAVGH LRDVRRLVVA MSRARLGLYV FGRVSLFKNC LELQQTFKLR PLKLSLVPED 540
  541 KFPTDRLASA AVASQDIKTV ENMSEMAQFV YERYMAKMEE LKGTLPSEEE LEAMRNQLLQ 600
  601 EDEESVPEAS EEPPEKRAAK EEPLSKKKTT EAFKPTPILN EINVDDTEMG QREQIEEEAT 660
  661 DQDKTQESAP AEES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 2is1A
Description: No description for 2is1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle