| Protein: | Ama-PB |
| Organism: | Drosophila melanogaster |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ama-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..2] | [335..306] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MQYNKRPDMA RLRLLIGLIF CLAISLDSVL SAPVISQISK DVVASVGDSV EFNCTVEEVG 60
61 QLSVSWAKRP SESDTNSVVL SMRNILSLPD QRYNVTVTEG PKTGSAIYTF RIQNIEVSDM 120
121 GPYECQVLVS ATEKVTKKLS LQIKTPPVIA ENTPKSTLVT EGQNLELTCH ANGFPKPTIS 180
181 WAREHNAVMP AGGHLLAEPT LRIRSVHRMD RGGYYCIAQN GEGQPDKRLI RVEVEFRPQI 240
241 AVQRPKIAQM VSHSAELECS VQGYPAPTVV WHKNGVPLQS SRHHEVANTA SSSGTTTSVL 300
301 RIDSVGEEDF GDYYCNATNK LGHADARLHL FQTVIPVPSL S
|
| Detection Method: |  |
| Confidence: | 42.39794 |
| Match: | 1cs6A |
| Description: | Axonin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.33804459527604 | bayes_pls_golite062009 |
| receptor activity | 1.90298241148243 | bayes_pls_golite062009 |
| signal transducer activity | 1.59395248964472 | bayes_pls_golite062009 |
| molecular transducer activity | 1.59395248964472 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.5023290800351 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.39482409678992 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.36789541796983 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.13671712991988 | bayes_pls_golite062009 |
| protein binding | 1.0782734177126 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.646668003618218 | bayes_pls_golite062009 |
| integrin binding | 0.599569390248921 | bayes_pls_golite062009 |
| IgG binding | 0.16605827100416 | bayes_pls_golite062009 |
