| Protein: | Taf1-PC |
| Organism: | Drosophila melanogaster |
| Length: | 2098 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Taf1-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
1861.0 | [0..1] | [2098..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MEMESDNSDD EGSIGNGLDL TGILFGNIDS EGRLLQDDDG EGRGGTGFDA ELRENIGSLS 60
61 KLGLDSMLLE VIDLKEAEPP SDDEEEEDAR PSAVSASEGM SAFDALKAGV KREDGAVKAQ 120
121 DDAIDYSDIT ELSED
|
| Detection Method: |  |
| Confidence: | 22.221849 |
| Match: | 1tbaA |
| Description: | TAF(II)230 TBP-binding fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [136-188] |
1 11 21 31 41 51
| | | | | |
1 CPRTPPEETS TYDDLEDAIP ASKVEAKLTK DDKELMPPPS APMRSGSGGG IEE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [189-389] |
1 11 21 31 41 51
| | | | | |
1 PAKSNDASSP SDDSKSTDSK DADRKLDTPL ADILPSKYQN VDVRELFPDF RPQKVLRFSR 60
61 LFGPGKPTSL PQIWRHVRKR RRKRNQSRDQ KTTNTGGSDS PSDTEEPRKR GFSLHYAAEP 120
121 TPAECMSDDE DKLLGDFNSE DVRPEGPDNG ENSDQKPKVA DWRFGPAQIW YDMLEVPDSG 180
181 EGFNYGFKTK AASTSSQPQL K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [390-507] |
1 11 21 31 41 51
| | | | | |
1 DERRVKSPED DVEDPSIADD AFLMVSQLHW EDDVVWDGND IKAKVLQKLN SKTNAAGWLP 60
61 SSGSRTAGAF SQPGKPSMPV GSGSSKQGSG ASSKKAQQNA QAKPAEAPDD TWYSLFPV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [508-672] |
1 11 21 31 41 51
| | | | | |
1 ENEELIYYKW EDEVIWDAQQ VSKVPKPKVL TLDPNDENII LGIPDDIDPS KINKSTGPPP 60
61 KIKIPHPHVK KSKILLGKAG VINVLAEDTP PPPPKSPDRD PFNISNDTYY TPKTEPTLRL 120
121 KVGGNLIQHS TPVVELRAPF VPTHMGPMKL RAFHRPPLKK YSHGP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [673-882] |
1 11 21 31 41 51
| | | | | |
1 MAQSIPHPVF PLLKTIAKKA KQREVERIAS GGGDVFFMRN PEDLSGRDGD IVLAEFCEEH 60
61 PPLINQVGMC SKIKNYYKRK AEKDSGPQDF VYGEVAFAHT SPFLGILHPG QCIQAIENNM 120
121 YRAPIYPHKM AHNDFLVIRT RNNYWIRSVN SIYTVGQECP LYEVPGPNSK RANNFTRDFL 180
181 QVFIYRLFWK SRDNPRRIRM DDIKQAFPAH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [883-1313] |
1 11 21 31 41 51
| | | | | |
1 SESSIRKRLK QCADFKRTGM DSNWWVIKPE FRLPSEEEIR AMVSPEQCCA YFSMIAAEQR 60
61 LKDAGYGEKF LFAPQEDDDE EAQLKLDDEV KVAPWNTTRA YIQAMRGKCL LQLSGPADPT 120
121 GCGEGFSYVR VPNKPTQTKE EQESQPKRSV TGTDADLRRL PLQRAKELLR QFKVPEEEIK 180
181 KLSRWEVIDV VRTLSTEKAK AGEEGMDKFS RGNRFSIAEH QERYKEECQR IFDLQNRVLA 240
241 SSEVLSTDEA ESSASEESDL EELGKNLENM LSNKKTSTQL SREREELERQ ELLRQLDEEH 300
301 GGPSGSGGAK GAKGKDDPGQ QMLATNNQGR ILRITRTFRG NDGKEYTRVE TVRRQPVIDA 360
361 YIKIRTTKDE QFIKQFATLD EQQKEEMKRE KRRIQEQLRR IKRNQERERL AQLAQNQKLQ 420
421 PGGMPTSLGD P
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1314-1355] |
1 11 21 31 41 51
| | | | | |
1 KSSGGHSHKE RDSGYKEVSP SRKKFKLKPD LKLKCGACGQ VG
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 1a1tA |
| Description: | HIV nucleocapsid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1356-1428] |
1 11 21 31 41 51
| | | | | |
1 HMRTNKACPL YSGMQSSLSQ SNPSLADDFD EQSEKEMTMD DDDLVNVDGT KVTLSSKILK 60
61 RHGGDDGKRR SGS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1429-1708] |
1 11 21 31 41 51
| | | | | |
1 SSGFTLKVPR DAMGKKKRRV GGDLHCDYLQ RHNKTANRRR TDPVVVLSSI LEIIHNELRS 60
61 MPDVSPFLFP VSAKKVPDYY RVVTKPMDLQ TMREYIRQRR YTSREMFLED LKQIVDNSLI 120
121 YNGPQSAYTL AAQRMFSSCF ELLAEREDKL MRLEKAINPL LDDDDQVALS FIFDKLHSQI 180
181 KQLPESWPFL KPVNKKQVKD YYTVIKRPMD LETIGKNIEA HRYHSRAEYL ADIELIATNC 240
241 EQYNGSDTRY TKFSKKILEY AQTQLIEFSE HCGQLENNIA
|
| Detection Method: | |
| Confidence: | 45.045757 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1709-1913] |
1 11 21 31 41 51
| | | | | |
1 KTQERARENA PEFDEAWGND DYNFDRGSRA SSPGDDYIDV EGHGGHASSS NSIHRSMGAE 60
61 AGSSHTAPAV RKPAPPGPGE VKRGRGRPRK QRDPVEEVKS QNPVKRGRGR PRKDSLASNM 120
121 SHTQAYFLDE DLQCSTDDED DDEEEDFQEV SEDENNAASI LDQGERINAP ADAMDGMFDP 180
181 KNIKTEIDLE AHQMADESMD VDPNY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1914-2098] |
1 11 21 31 41 51
| | | | | |
1 DPSDFLAMHK QRQSLGEPSS LQGAFTNFLS HEQDDNGPYN PAEASTSAAS GADLGMDASM 60
61 AMQMAPEMPV NTMNNGMGID DDLDISESDE EDDGSRVRIK KEVFDDGDYA LQHQQMGQAA 120
121 SQSQIYMVDS SNEPTTLDYQ QPPQLDFQQV QEMEQLQHQV MPPMQSEQLQ QQQTPQGDND 180
181 YAWTF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
