| Protein: | sol-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sol-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1080.0 | [0..1] | [1594..1] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MGTISSVLQW SCTKCNTINP TESLKCFNCG TVRKVFPQQQ QQQHRSSSIT ASWTADDALE 60
61 QEQAEKGQER DKEKGRAAVA RSEYKHVYKS LLRGCLKRPQ RNSQNLPANC VDCEDTRKYI 120
121 KSSIELYRHF SNPALNRRWV CHACGTDNSS VTWHCLICDT VSYLAPIYKD AIAADRGQDL 180
181 AGSLGNRGEL LAADHSHPHH HHHYLHQELE EQHQHQLHSQ HLHKRHLKGR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [231-423] |
1 11 21 31 41 51
| | | | | |
1 SASGSGSGPG SGSGLRRTQS LSTAIDKSAS GRSCHICYAN NQSKDIFNLP QIKPAPQLTG 60
61 IPPVAACSNS RFAIANDTFC RRKQNNNNKN QNHKVVRESG AKRKYNFTIT TLSRSAAKDA 120
121 GHGQMKPLRQ VVNLNLNLQQ EPQQKSPANP QQLQRKTQRE PAAVSMNPTQ FTIPRNGVFI 180
181 AVNEWSEPMA SSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| protein binding | 0.896934807256194 | bayes_pls_golite062009 |
| binding | 0.843808199409152 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.692376479375244 | bayes_pls_golite062009 |
|
Region A: Residues: [424-550] |
1 11 21 31 41 51
| | | | | |
1 SVSSSSNHHH HHHSNSNSNS SGNSNIINNN SSSSSGSNKL YENECVALAQ QQLRAAAAQA 60
61 AQAAATAVAI ASSPSAKAMA EPAPTATMPI YAQVNKQHKL KKKQQIASES QTNNNTGSGE 120
121 IADAVSE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [551-672] |
1 11 21 31 41 51
| | | | | |
1 SLTAGLGTST DGSGEASESE SQVEEHSIYA KVWKGPRKAT ESKIMHDPGS SSRLSGAASA 60
61 AAGTASAGAI AAAVGAAAAS RHDNKTQLGN GSRSKMWICI KCSYAYNRLW LQTCEMCEAK 120
121 AE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [673-993] |
1 11 21 31 41 51
| | | | | |
1 QQQQQLQLQQ QQQQQQQHHH HHLQQQQAEA PRDEPWTCKK CTLVNYSTAM ACVVCGGSKL 60
61 KSISSIEDMT LRKGEFWTCS HCTLKNSLHS PVCSACKSHR QPQLSMAMEA VRERPDGQSY 120
121 EEQDAAAVGG GGGSAHQSGA NEVKAPTALN LPLTSVALPM PMLQLPTSTA AGLRGSRSPS 180
181 PRMQLLPSLQ QQRNSSSSGA IPKRHSTGGS IVPRNISIAG LANYNLQQGQ GVGSASVVSA 240
241 SGAGSGAGAV GASTSTKKWQ CPACTYDNCA ASVVCDICSS PRGLASAVLG EALGRKSVRV 300
301 ALTPADIRQE SKLMENLRQL E
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1m6bA |
| Description: | Receptor protein-tyrosine kinase Erbb-3 extracellular domain; Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.03276746586736 | bayes_pls_golite062009 |
| protein binding | 2.01842861979642 | bayes_pls_golite062009 |
| growth factor binding | 1.94941983865103 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 1.16573145970749 | bayes_pls_golite062009 |
|
Region A: Residues: [994-1594] |
1 11 21 31 41 51
| | | | | |
1 ETEALTKWQN IIQYCRDNSE LFVDDSFPPA PKSLYYNPAS GAGEGNPVVQ WRRPHEINCD 60
61 GGAYPPWAVF RTPLPSDICQ GVLGNCWLLS ALAVLAERED LVKEVLVTKE ICGQGAYQVR 120
121 LCKDGKWTTV LVDDLLPCDK RGHLVYSQAK RKQLWVPLIE KAVAKIHGCY EALVSGRAIE 180
181 GLATLTGAPC ESIPLQASSL PMPSEDELDK DLIWAQLLSS RCVRFLMGAS CGGGNMKVDE 240
241 EEYQQKGLRP RHAYSVLDVK DIQGHRLLKL RNPWGHYSWR GDWSDDSSLW TDDLRDALMP 300
301 HGASEGVFWI SFEDVLNYFD CIDICKVRSG WNEVRLQGTL QPLCSISCVL LTVLEPTEAE 360
361 FTLFQEGQRN SEKSQRSQLD LCVVIFRTRS PAAPEIGRLV EHSKRQVRGF VGCHKMLERD 420
421 IYLLVCLAFN HWHTGIEDPH QYPQCILAIH SSKRLLVEQI SPSPHLLADA IISLTLTKGQ 480
481 RHEGREGMTA YYLTKGWAGL VVMVENRHEN KWIHVKCDCQ ESYNVVSTRG ELKTVDSVPP 540
541 LQRQVIIVLT QLEGSGGFSI AHRLTHRLAN SRGLHDWGPP GATHCPPIEN VHGLHAPRLI 600
601 T
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1qxpA |
| Description: | Crystal Structure of a mu-like calpain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 0.896934807256194 | bayes_pls_golite062009 |
| binding | 0.843808199409152 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.692376479375244 | bayes_pls_golite062009 |
