YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0301767, tay...
Organism: Drosophila melanogaster
Length: 2486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0301767, tay....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
821.0 [0..3] [1964..88]

Back

Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSNASAKS KTSASGSSSI NGIGSQIKHI SSSQDIGSSV PAVPVQDEKS ESHSHSHSHS  60
   61 SSSSQSSQSQ SQSQPQSTVL TVVGQSISKS STGALAVLHL PPPTATALVQ ASANIADLGS 120
  121 MPRARPSFVS N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSSTAATTTT ATSASDGGKT MAVAAIPPAS PVSISEPTCP SVSTVSMAPS ACDFDSDTEL  60
   61 SIVAAAAAVS ASAGIDSRSP TSPPTAAGST IMPQLNSSAG GTASIAGNQS GFGAGSGAVA 120
  121 AGNTNGHSTT SSSSTHLSLN AKQQRQQKRR RERAQRLQAE RDSRCNANSL SGTFIAGSSV 180
  181 GVGSAMSAAN GGQGGGVGLV TPNSSVGGGS SAVAMGNGSA AGPGNNGMIY HINSAGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [369-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEDSNNSNG NFTSSSNGSN NLLPPTDSIA SLLLNPPHSP ECNSGLMATP SDSEGESLDE  60
   61 DLLSTSSSST LLLPRDKPPP RPPPPVRRKL PRSPVLEEEI IDGFAILEFK TYEDLEFAIK 120
  121 LGQKRKEKRL SALDELTCTY SIEEMKIPKV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [519-742]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDTGQSQPLR VTSLSTLTVN NNNLKENPQP SLHRDRGGNV ISNNNNNNSS NNNNSMINSN  60
   61 GPNANSNSSS LSNVVYLLPS VNMVGNVLET EAEPRDHWRS EYGQQQDQLQ SDNSANSKSN 120
  121 NNISDDNQIN NSSHQINHTT NNQSSKQQQA ADGGCNAAKM QVNNSATVST RFLENDNDSL 180
  181 MLDISLPSLG VGGAVSHSHD HIDVGVIHAS CTGSSSDTKK SHNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [743-908]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PATSNTIDQL HVTKPLPTHQ LNNLISSDLN AAANANANSN HLGVCKLGSQ SAQVAKKSMG  60
   61 LENIETVTNS ATCRSLDIQE LANVSAQSFG ASSSSSSSSI SIKKENEQSD LLNDASTNCS 120
  121 SNSKGNNICD NVSNDKKNSE QIFDIDNPPT PMNISNTSSC SDRSSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [909-1139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKFSELPHLK KKSAACGDRD NGPYAGVPFA AAMGTVSPDS DPSKALNIKN ASESASGKAV  60
   61 HAHAGAPIPP PPAASVGDPG NRELGVLQKT SPDKPLYPNL CAPPSVSSVQ FPNVGISAGN 120
  121 EKIASTVASD IDQKIIFNSK ATASVSNGLS SGVQRSIVPL LSAAPSPAAV TLSSPFSAHI 180
  181 AAAPNAAGLS ILSSASSVIL ANSSIKNTNN GSNNGSANGQ GQLSSVGLSS T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1140-1287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEIAKSNSVP TTSSPPNPMV NGFLSVYPPP AATIATSSVT TSALSRVSPN AANKLVPPVS  60
   61 ATTSISINTN YVGISGGTTT TSGMGKVVFG AGGNAIVGTG SPLLFPGAPP APISHVATGV 120
  121 PMIIQAPPYR APYTNYPLYT PYSGLTHG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1288-1371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYLPPVLPVA TPNLSNLPPT QHRSSDSRNS RESPASLKST PSNIGLNVSM APTLRSITPL  60
   61 NNSSAISSGA SQPVVSVVPS ANST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1372-1555]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALSMSNPHIS HSHHVPAYAS GAFSSSAAAG TSTPNSGLST LAVTSLSTSA APQPHSHFPQ  60
   61 STQMLPQSGN FSSVSHLLTT HPMSSQNQPM VRCGSTLYSQ SSAAATAPPS AAAAVSNFTP 120
  121 SVLAVQSLTT AVTSSSSSPS TLSSSVIQKV ISPKGESPCN KDRDSSYSTN IRSHGASTML 180
  181 PGAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1556-1646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGIGLGSSFC GIAPSQYGGT GTPVLSSSSS MPPGLGNLSS YSSKAALWLN SPANAVVTTC  60
   61 APTTPIVSSG SARPTPPLSN CTSMGIGMVN A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1647-1812]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASTARSSCNA ISPLSIPATA GIHVSATNPS FQSSSYFPTP LAPPPSSPSP ATSSAAIISS  60
   61 SASQFNPAVS HSMSSIVTTA GATTTTASSV TQPSVAAISN PVTNTPHPFS AESLFQPSKN 120
  121 DQADLLRREL DSRFLDRSGL AVTPTPPSST YLRTDLQHQQ HAHLHQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1813-2018]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPQLLPPVSA PSTPLSAVQP SSGQIFPPPL FKDISKISSV DPQFYRTGMG LPPGGYSGYT  60
   61 SAGLLHSGLG GPTPFMPPNH LTSFAPKKTG RWNAMHVRIA WEIYYHQNKQ SPEKQPGFPT 120
  121 ASSNAGSINA PIPPGNMISG GGGGMASGAS TPVNNVAAIP AVGGGVLVSN GPPSVLGMKT 180
  181 TPTLGMSSTP QHILHRASEM PPSAAF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [2019-2394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGGLPGRLAF ETSPLAASFI GAPPSHIGTA VSPFGRYVTP FGFTGLTHFG GHLDSWRTNA  60
   61 MQRSVAYHPS SAAPSPNWPV KSDPGLDNAR REAEEREREL RDREQRERDR QRREREERER 120
  121 KEKEEKLKRE QQERERERER DRKERERERR EIERREMERE RMLQQQRINE SNKQAAVQAA 180
  181 AAATAPVRDR SPHRNVGELN TEIRIKEEHP RTKEEQDVML LRASAAAVGV GDPRYHSSSL 240
  241 AAAQASAAAA AAHHHHANFM AASRHGLPPP PSHLTRTMMP PTLSVGGPIT HFGAPAPPGW 300
  301 GIDPYRDPYP ILRYNPIMEA ALRHEAEERQ KAINIYAAQS AAHLRSKEPS PIPPSVGSLG 360
  361 PPPPHHRLQI VSSVAQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #14
Region A:
Residues: [2395-2486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGVQQPGPPS QQQQQQMSSG GGMVKNSGGP QAPGSIPVQH MISVDSMGQQ SVSAKKESDH  60
   61 TMGIVSNAGV GLSSVPGGVI GISPVSSVAP SR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle