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View Structure Prediction Details

Protein: HP5-PA
Organism: Drosophila melanogaster
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HP5-PA.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
207.0 [0..11] [431..693]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIFDMVKAA PPPQTINPVD TKLSTPSPIP PDSPIDVNDL LESGNQLDEN DLRMSRKSKN  60
   61 VEQCSIDLFD SETSFDHLDE SLAKRKRKSV ANSKPNKSRK STVSASTPHN KRPKVSIDDD 120
  121 GEAIEEDQQS MVVVPTKTKA QQKMFSDQQS PNVKRKVRVL LRRLKQTEID SAVESLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [178-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSFINVPEI VNQSGTSGRS RHKKRKTSPK KQKSSTAQTN FHIKVPLQNG AKKRALNHSL  60
   61 RAHTPPPSLA KSSESTHSAL KRSPKPKIKA KRLSSRGRNT DPDLVKRYGA HFFGCVVKVR 120
  121 RTRLPSAKWP DCKPPPIGDG VVRKVYPKKA VSFSEAVEIL GSPGGPSRRS TFGSLSSRGA 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [358-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKPTRLQRVD ATGNVLEDIA LTSTPLFSSS SGGSRERVRR RSCNGTPVVG RLKLRRLGRL  60
   61 SIDNSSSRSD GGGDNDDDDE EYIGRRMHLL N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle