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View Structure Prediction Details

Protein: FBpp0310013, Crag-PA
Organism: Drosophila melanogaster
Length: 1671 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310013, Crag-PA.

Description E-value Query
Range
Subject
Range
Crag-PB - The gene Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein is referred to in Fly...
1607.0 [0..1] [1671..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKRIADYF VVAGMPENPQ LLQENSFNDS GRLRAATTIE PITDIGVYFP LLGEEVPEGY  60
   61 EILSHTPTGL QANLNHGSVR TTDCYIYFRR GKDRPPLVDI GVLYDGHERI MSDAEIVAET 120
  121 PGGRVANVNN SSAKTFLTYR RARADMPCNE LVVTELCVIV QSKGERAPHA FCLIYKTLNK 180
  181 GYVGSDVYLC YKKSMY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPKHISYKPE ILLRYPTFDH TDFPLNLCPS VPLFCLPMGA SLEAWPHVNG TEKRKPISPV  60
   61 FSTFVLTVSD GTYKVYGSAL TFYEDYD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.107905
Match: PF03456.9
Description: No description for PF03456.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [284-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESKLSAEQKE LLGWDEEFGA QHSLHMIKAI CLLSHHPFGD TFDKWLKYLH RMVLYDVNIP  60
   61 IPVERYITQL LDEVPFPAPS IHLQLSSESN DRILLTQPED SPLPRSGAGF HILLQNLGTD 120
  121 NCLHVLLLAL TEQKILIHSL RPATLTAVAE AIVSLLFPFK WQCPYIPLCP LGLAEVLHAP 180
  181 LPYLIGVDSR FFDLYEPPTD VTCIDLDTNN ISL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.886057
Match: PF02141.12
Description: No description for PF02141.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [497-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CESQRHLSPK LLPKRAARLL RQTLTELENA KPISYDSTNS LDRDIRKRKR ELVLEQRIQE  60
   61 AFLLFMASIL RGYRDFLVPI SKAPSVGATD PSALFQLKAF LRSRDKSHQK FFELMMKTQM 120
  121 FIRFIEERSF VSDGDHGLSF FDECAEKVGN YDETPAQLHL VDWDTGQNSE RTKYIFPPDS 180
  181 VTPAGSQP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.200659
Match: PF03455.10
Description: No description for PF03455.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [685-763]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGGGGGLAYN YENFTLQPEL LQSTKKTALS KFLQLQLNAS LSPGSPIARR TKHEIKLSQK  60
   61 MASRCQQHPE AWSKYLLAT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [764-878]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CYSLYFLILP SMVLDPRHAG KEPEILRAAY DVLVRASRLK ITCDEFCYRI MMQLCGIHNL  60
   61 PVLAVRLHYL MKRSGVQANA LTYGFYNRCV LESQWPQDST TISQIRWNRI KNVVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [879-949]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAAQFRKAGK QRAASKVNKS LSASQDQNLS TLETVDGQSR TSLASSSGDG GGHGLLDFAA  60
   61 FDRLRNKLGS I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [950-1151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRQTVTGGNN ETMGDAVNNT GLLIPGELSA PNTPTYGGDT EILAKALQQQ QPRKQIMSIG  60
   61 GGDDDDEDED EDEYTAGSPS TPQKQLEAGA DDLEYAGGGD YEADEEDEDE VDEHVAAQRA 120
  121 RQRVQSPTKI SPRTPVTQND PLGALNEEES AASATPTQET QQEQQHSQSQ IDSSIYSDKP 180
  181 ILFRGQRSAT FDESTQIGKS MH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1152-1303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSETMPVASS GVTNSLANIG SSLKFTFGRY SPARLSLKKD LKLPANIIEN ISSISPSLTG  60
   61 KKSNELIQGS LSSIKSAANS LTKKFDEIKG VISANSTPTK TNNGHHPHGL HHGHHHPHHH 120
  121 HHHHSQHGNA EQEEHDAAVH EEGKLRRVSS DL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1304-1368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPWGRLSESR KSSYNNLVPL GENSSTGALH MHAFPAVPDN LYSLTSENAA DRDCDVLIQL  60
   61 TTCSQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1369-1477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CHNCSVLVYD EEIMSGWTAE DSNLNTTCHA CNKLTVPFLS VQIERQVEES EQSDPLQDGK  60
   61 EQIANGNSHK TSLTVPYLNP LVLRKELENI LTQEGDIALI KPEFVDEHP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1478-1671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIYWNLLWLM ERIESKTHLP ELCLPVPSDK EHIDPLSKVK TVHIQCLWDN LSLHTEASGP  60
   61 PMYLLYRETQ PTSPLIKALL TDQAQLNKNV IQQIISAIRC NDFATPLKRL ANERHKLKSN 120
  121 GVERSHSFYR DILFLALTAI GRSNVDLATF HREYAAVFDK LTERECNMYY RNQDLPPSAS 180
  181 TIFCRAYFRP LLLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle