| Protein: | gi|45446812, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 924 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45446812, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
547.0 | [0..1] | [924..1] |
|
Region A: Residues: [1-357] |
1 11 21 31 41 51
| | | | | |
1 MSIQKLNDTT NSGYVSSEET DSLLVSSSNP SKGGGRTALL RQVKSNSTNG PTTGASTSSS 60
61 GSVSGGGGGS GSGGGSASGS AAGASKPTLM RQDRTSTYLT SPQQSQHARM GSEESMRGGA 120
121 SGAAGHDEDV EQGLVRSSIV PDIEVHEEDQ EQHSQQLNAT TMATMTNNQQ QQQPTISIMN 180
181 LSLKPGDSHS HSSSPGSHPN LGTSSYQNLA SSIPPSVPSR CRACRNCSRR ASTTPTTLID 240
241 RSASRDSVKS AFQQGNLSGS MAICISNSAL PQQQQLQQQY HLQQQQQQHY QLQQHHLHQQ 300
301 QLQQSQQQVP PVLITSSPTN GSRIIRQSSQ PESSSTAICC GPHSACVGHA HSHSHTV
|
| Detection Method: |  |
| Confidence: | 5.39794 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [358-829] |
1 11 21 31 41 51
| | | | | |
1 PNVSLKQLRE SSGDGIAGIA ADSLRINGGM RPFKQLRKPA STLSIPGSMK TPSIANREQI 60
61 SSGCNEEAAE ALVGIHSDYP RYMEERALTG GNTSRKPSTN SAKHKPNVGY RLGKRKALFE 120
121 KRKRISDYAL VMGMFGIIVM VIENELSSAG VYTKASFYST ALKTLISVST VILLGLIVAY 180
181 HALEVQLFMI DNCADDWRIA MTWQRISQIG LELFICAIHP IPGEYYFQWT TKLANKNKTI 240
241 GTEMVPYDVA LSLPMFLRLY LICRVMLLHS KLFTDASSRS IGALNRINFN TRFVLKTLMT 300
301 ICPGTVLLVF MVSLWIIASW TLRQCERFHD EEHANLLNAM WLIAITFLSV GFGDIVPNTY 360
361 CGRGIAVSTG IMGAGCTALL VAVVSRKLEL TRAEKHVHNF MMDTQLTKRL KNAAANVLRE 420
421 TWLIYKHTRL VKRVNPGRVR THQRKFLLAI YALRKVKMDQ RKLMDNANTI TD
|
| Detection Method: | |
| Confidence: | 60.221849 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [830-924] |
1 11 21 31 41 51
| | | | | |
1 MAKTQNTVYE IISDMSSRQD AIEERLTNLE DKMQSIQEHM ESLPDLLSRC LTQHQERIEQ 60
61 RRNFLHPDTA AVAPIQAPTP QSMFNAAPML FPHSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
