| Protein: | gi|40018629 |
| Organism: | Homo sapiens |
| Length: | 1173 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|40018629.
| Description | E-value | Query Range |
Subject Range |
|
|
1905.0 | [0..1] | [1173..67] |
|
|
1902.0 | [0..1] | [1173..24] |
|
|
1890.0 | [0..4] | [1173..139] |
|
|
1874.0 | [0..1] | [1173..91] |
|
|
1844.0 | [0..1] | [1173..1] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MAVETLSPDW EFDRVDDGSQ KIHAEVQLKN YGKFLEEYTS QLRRIEDALD DSIGDVWDFN 60
61 LDPIALKLLP YEQSSLLELI KTENKVLNKV ITVYAALCCE IKKLKYEAET KFYNGLLFYG 120
121 EGATDASMVE GDCQIQMGR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-233] |
1 11 21 31 41 51
| | | | | |
1 FISFLQELSC FVTRCYEVVM NVVHQLAALY ISNKIAPKII ETTGVHFQTM YEHLGELLTV 60
61 LLTLDEIIDN HITLKDHWTM YKRLLKSVHH NPSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.970 | a.47.1 | STAT |
|
Region A: Residues: [234-312] |
1 11 21 31 41 51
| | | | | |
1 FGIQEEKLKP FEKFLLKLEG QLLDGMIFQA CIEQQFDSLN GGVSVSKNST FAEEFAHSIR 60
61 SIFANVEAKL GEPSEIDQR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.846 | a.144.1 | PABC (PABP) domain |
|
Region A: Residues: [313-423] |
1 11 21 31 41 51
| | | | | |
1 DKYVGICGLF VLHFQIFRTI DKKFYKSLLD ICKKVPAITL TANIIWFPDN FLIQKIPAAA 60
61 KLLDRKSLQA IKIHRDTFLQ QKAQSLTKDV QSYYVFVSSW MMKMESILSK E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [424-577] |
1 11 21 31 41 51
| | | | | |
1 QRMDKFAEDL TNRCNVFIQG FLYAYSISTI IKTTMNLYMS MQKPMTKTSV KALCRLVELL 60
61 KAIEHMFYRR SMVVADSVSH ITQHLQHQAL HSISVAKKRV ISDKKYSEQR LDVLSALVLA 120
121 ENTLNGPSTK QRRLIVSLAL SVGTQMKTFK DEEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [578-811] |
1 11 21 31 41 51
| | | | | |
1 FPLQVVMKKL DLISELRERV QTQCDCCFLY WHRAVFPIYL DDVYENAVDA ARLHYMFSAL 60
61 RDCVPAMMHA RHLESYEILL DCYDKEIMEI LNEHLLDKLC KEIEKDLRLS VHTHLKLDDR 120
121 NPFKVGMKDL ALFFSLNPIR FFNRFIDIRA YVTHYLDKTF YNLTTVALHD WATYSEMRNL 180
181 ATQRYGLVMT EAHLPSQTLE QGLDVLEIMR NIHIFVSRYL YNLNNQIFIE RTSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [812-903] |
1 11 21 31 41 51
| | | | | |
1 NKHLNTINIR HIANSIRTHG TGIMNTTVNF TYQFLKKKFY IFSQFMYDEH IKSRLIKDIR 60
61 FFREIKDQND HKYPFDRAEK FNRGIRKLGV TP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.880 | a.7.6 | Ribosomal protein S20 |
|
Region A: Residues: [904-1009] |
1 11 21 31 41 51
| | | | | |
1 EGQSYLDQFR QLISQIGNAM GYVRMIRSGG LHCSSNAIRF VPDLEDIVNF EELVKEEGLA 60
61 EETLKAARHL DSVLSDHTRN SAEGTEYFKM LVDVFAPEFR RPKNIH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.854 | a.7.5 | Tubulin chaperone cofactor A |
|
Region A: Residues: [1010-1173] |
1 11 21 31 41 51
| | | | | |
1 LRNFYIIVPP LTLNFVEHSI SCKEKLNKKN KIGAAFTDDG FAMGVAYILK LLDQYREFDS 60
61 LHWFQSVREK YLKEIRAVAK QQNVQSASQD EKLLQTMNLT QKRLDVYLQE FELLYFSLSS 120
121 ARIFFRADKT AAEENQEKKE KEEETKTSNG DLSDSTVSAD PVVK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
