| Protein: | gi|40018629 |
| Organism: | Homo sapiens |
| Length: | 1173 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|40018629.
| Description | E-value | Query Range |
Subject Range |
|
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1905.0 | [0..1] | [1173..67] |
|
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1902.0 | [0..1] | [1173..24] |
|
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1890.0 | [0..4] | [1173..139] |
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1874.0 | [0..1] | [1173..91] |
|
|
1844.0 | [0..1] | [1173..1] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MAVETLSPDW EFDRVDDGSQ KIHAEVQLKN YGKFLEEYTS QLRRIEDALD DSIGDVWDFN 60
61 LDPIALKLLP YEQSSLLELI KTENKVLNKV ITVYAALCCE IKKLKYEAET KFYNGLLFYG 120
121 EGATDASMVE GDCQIQMGR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.717 | a.24.1 | Apolipoprotein |
| View | Download | 0.717 | a.24.1 | Apolipoprotein |
| View | Download | 0.697 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.690 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.631 | a.246.1 | Description not found. |
| View | Download | 0.628 | a.281.1 | Description not found. |
| View | Download | 0.625 | a.25.1 | Ferritin-like |
| View | Download | 0.620 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.567 | a.7.1 | Spectrin repeat |
| View | Download | 0.559 | a.7.7 | BAG domain |
| View | Download | 0.290 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.275 | d.110.4 | SNARE-like |
| View | Download | 0.263 | a.1.1 | Globin-like |
| View | Download | 0.238 | d.110.4 | SNARE-like |
| View | Download | 0.232 | d.227.1 | OsmC-like |
|
Region A: Residues: [140-233] |
1 11 21 31 41 51
| | | | | |
1 FISFLQELSC FVTRCYEVVM NVVHQLAALY ISNKIAPKII ETTGVHFQTM YEHLGELLTV 60
61 LLTLDEIIDN HITLKDHWTM YKRLLKSVHH NPSK
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.970 | a.47.1 | STAT |
| View | Download | 0.945 | a.47.1 | STAT |
| View | Download | 0.944 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.933 | a.47.2 | t-snare proteins |
| View | Download | 0.933 | a.47.2 | t-snare proteins |
| View | Download | 0.928 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.928 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.928 | a.24.3 | Cytochromes |
| View | Download | 0.918 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.901 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.814 | a.7.8 | GAT domain |
| View | Download | 0.660 | a.7.8 | GAT domain |
| View | Download | 0.619 | g.39.1 | Glucocorticoid receptor-like (DNA-binding domain) |
| View | Download | 0.594 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.548 | a.7.8 | GAT domain |
|
Region A: Residues: [234-312] |
1 11 21 31 41 51
| | | | | |
1 FGIQEEKLKP FEKFLLKLEG QLLDGMIFQA CIEQQFDSLN GGVSVSKNST FAEEFAHSIR 60
61 SIFANVEAKL GEPSEIDQR
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.846 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.846 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.806 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.788 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.730 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.730 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.703 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.697 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.365 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.296 | a.74.1 | Cyclin-like |
| View | Download | 0.290 | a.159.5 | Description not found. |
| View | Download | 0.288 | a.1.1 | Globin-like |
| View | Download | 0.284 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [313-423] |
1 11 21 31 41 51
| | | | | |
1 DKYVGICGLF VLHFQIFRTI DKKFYKSLLD ICKKVPAITL TANIIWFPDN FLIQKIPAAA 60
61 KLLDRKSLQA IKIHRDTFLQ QKAQSLTKDV QSYYVFVSSW MMKMESILSK E
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.541 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.540 | c.23.5 | Flavoproteins |
| View | Download | 0.538 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.538 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.523 | a.29.13 | Description not found. |
| View | Download | 0.520 | a.29.16 | Description not found. |
| View | Download | 0.510 | a.26.1 | 4-helical cytokines |
| View | Download | 0.429 | a.25.1 | Ferritin-like |
| View | Download | 0.390 | a.25.1 | Ferritin-like |
| View | Download | 0.386 | a.2.5 | Prefoldin |
| View | Download | 0.317 | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.281 | d.110.4 | SNARE-like |
| View | Download | 0.260 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.219 | c.44.1 | Phosphotyrosine protein phosphatases I |
| View | Download | 0.215 | d.360.1 | Description not found. |
|
Region A: Residues: [424-577] |
1 11 21 31 41 51
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1 QRMDKFAEDL TNRCNVFIQG FLYAYSISTI IKTTMNLYMS MQKPMTKTSV KALCRLVELL 60
61 KAIEHMFYRR SMVVADSVSH ITQHLQHQAL HSISVAKKRV ISDKKYSEQR LDVLSALVLA 120
121 ENTLNGPSTK QRRLIVSLAL SVGTQMKTFK DEEL
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [578-811] |
1 11 21 31 41 51
| | | | | |
1 FPLQVVMKKL DLISELRERV QTQCDCCFLY WHRAVFPIYL DDVYENAVDA ARLHYMFSAL 60
61 RDCVPAMMHA RHLESYEILL DCYDKEIMEI LNEHLLDKLC KEIEKDLRLS VHTHLKLDDR 120
121 NPFKVGMKDL ALFFSLNPIR FFNRFIDIRA YVTHYLDKTF YNLTTVALHD WATYSEMRNL 180
181 ATQRYGLVMT EAHLPSQTLE QGLDVLEIMR NIHIFVSRYL YNLNNQIFIE RTSN
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [812-903] |
1 11 21 31 41 51
| | | | | |
1 NKHLNTINIR HIANSIRTHG TGIMNTTVNF TYQFLKKKFY IFSQFMYDEH IKSRLIKDIR 60
61 FFREIKDQND HKYPFDRAEK FNRGIRKLGV TP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.880 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.842 | a.24.4 | Hemerythrin |
| View | Download | 0.821 | a.24.28 | Description not found. |
| View | Download | 0.812 | a.29.10 | Description not found. |
| View | Download | 0.805 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.801 | a.46.1 | Methionine synthase domain |
| View | Download | 0.780 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.777 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.773 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
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Region A: Residues: [904-1009] |
1 11 21 31 41 51
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1 EGQSYLDQFR QLISQIGNAM GYVRMIRSGG LHCSSNAIRF VPDLEDIVNF EELVKEEGLA 60
61 EETLKAARHL DSVLSDHTRN SAEGTEYFKM LVDVFAPEFR RPKNIH
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.854 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.854 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.802 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.802 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.797 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.680 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.680 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.622 | a.7.1 | Spectrin repeat |
| View | Download | 0.500 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.291 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.273 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.219 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.215 | a.16.1 | S15/NS1 RNA-binding domain |
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Region A: Residues: [1010-1173] |
1 11 21 31 41 51
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1 LRNFYIIVPP LTLNFVEHSI SCKEKLNKKN KIGAAFTDDG FAMGVAYILK LLDQYREFDS 60
61 LHWFQSVREK YLKEIRAVAK QQNVQSASQD EKLLQTMNLT QKRLDVYLQE FELLYFSLSS 120
121 ARIFFRADKT AAEENQEKKE KEEETKTSNG DLSDSTVSAD PVVK
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
