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View Structure Prediction Details

Protein: MLF1IP
Organism: Homo sapiens
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLF1IP.

Description E-value Query
Range
Subject
Range
gi|114597075 - gi|114597075|ref|XP_001162336.1| PREDICTED: MLF1 interacting protein isoform 1 [Pan troglodytes]
0.0 [14..418] [17..421]
CENPU_MOUSE - Centromere protein U OS=Mus musculus GN=Cenpu PE=1 SV=2
0.0 [5..416] [3..408]
CENPU_RAT - Centromere protein U OS=Rattus norvegicus GN=Cenpu PE=2 SV=1
0.0 [5..417] [3..409]
gi|76655665 - gi|76655665|ref|XP_875285.1| PREDICTED: similar to MLF1 interacting protein [Bos taurus]
0.0 [5..417] [284..692]
gi|113958976 - gi|113958976|gb|ABI49142.1| MLF1 interacting protein isoform 1 [Homo sapiens]
0.0 [1..330] [1..330]
gi|73979582 - gi|73979582|ref|XP_849692.1| PREDICTED: similar to MLF1 interacting protein [Canis familiaris]
0.0 [32..417] [30..414]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRGRRRPR PHRSEGARRS KNTLERTHSM KDKAGQKCKP IDVFDFPDNS DVSSIGRLGE  60
   61 NEKDEETYET FDPPLHSTAI YADEEEFSKH CGLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSTPPGKEA KRSSDTSGNE ASEIESVKIS AKKPGRKLRP ISDDSESIEE SDTRRKVKSA  60
   61 EKISTQRHEV IRTTASSELS EKPAESVTSK KTGPLSAQPS VEKENLAIES QSKTQKKGKI 120
  121 SHDKRKKSRS KAIGSDTSDI VHIWCPEGMK TSDIKELNIV LPEFEKTHLE HQQRIESKVC 180
  181 KAAIATFYVN VKEQFIKMLK ESQMLTNLKR KNAKMISDIE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.963
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #3
Region A:
Residues: [315-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKRQRMIEVQ DELLRLEPQL KQLQTKYDEL KERKSSLRNA AYFLSNLKQL YQDYSDVQAQ  60
   61 EPNVKETYDS SSLPALLFKA RTLLGAESHL RNINHQLEKL LDQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle