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View Structure Prediction Details

Protein: MLF1IP
Organism: Homo sapiens
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLF1IP.

Description E-value Query
Range
Subject
Range
gi|114597075 - gi|114597075|ref|XP_001162336.1| PREDICTED: MLF1 interacting protein isoform 1 [Pan troglodytes]
0.0 [14..418] [17..421]
CENPU_MOUSE - Centromere protein U OS=Mus musculus GN=Cenpu PE=1 SV=2
0.0 [5..416] [3..408]
CENPU_RAT - Centromere protein U OS=Rattus norvegicus GN=Cenpu PE=2 SV=1
0.0 [5..417] [3..409]
gi|76655665 - gi|76655665|ref|XP_875285.1| PREDICTED: similar to MLF1 interacting protein [Bos taurus]
0.0 [5..417] [284..692]
gi|113958976 - gi|113958976|gb|ABI49142.1| MLF1 interacting protein isoform 1 [Homo sapiens]
0.0 [1..330] [1..330]
gi|73979582 - gi|73979582|ref|XP_849692.1| PREDICTED: similar to MLF1 interacting protein [Canis familiaris]
0.0 [32..417] [30..414]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRGRRRPR PHRSEGARRS KNTLERTHSM KDKAGQKCKP IDVFDFPDNS DVSSIGRLGE  60
   61 NEKDEETYET FDPPLHSTAI YADEEEFSKH CGLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSTPPGKEA KRSSDTSGNE ASEIESVKIS AKKPGRKLRP ISDDSESIEE SDTRRKVKSA  60
   61 EKISTQRHEV IRTTASSELS EKPAESVTSK KTGPLSAQPS VEKENLAIES QSKTQKKGKI 120
  121 SHDKRKKSRS KAIGSDTSDI VHIWCPEGMK TSDIKELNIV LPEFEKTHLE HQQRIESKVC 180
  181 KAAIATFYVN VKEQFIKMLK ESQMLTNLKR KNAKMISDIE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.963
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #3
Region A:
Residues: [315-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKRQRMIEVQ DELLRLEPQL KQLQTKYDEL KERKSSLRNA AYFLSNLKQL YQDYSDVQAQ  60
   61 EPNVKETYDS SSLPALLFKA RTLLGAESHL RNINHQLEKL LDQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle