| Protein: | EIF3B |
| Organism: | Homo sapiens |
| Length: | 814 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3B.
| Description | E-value | Query Range |
Subject Range |
|
|
577.0 | [0..172] | [770..1170] |
|
|
569.0 | [0..141] | [777..873] |
|
|
562.0 | [0..1] | [814..1] |
|
|
558.0 | [0..172] | [770..1042] |
|
|
556.0 | [0..1] | [814..1] |
|
|
555.0 | [0..141] | [738..577] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MQDAENVAVP EAAEERAEPG QQQPAAEPPP AEGLLRPAGP GAPEAAGTEA SSEEVGIAEA 60
61 GPESEVRTEP AAEAEAASGP SESPSPPAAE ELPGSHAEPP VPAQGEAPGE QARDERSDSR 120
121 AQAVSEDAGG NEGRAAEAEP RALENGDADE PSFSDPEDFV DD
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [163-251] |
1 11 21 31 41 51
| | | | | |
1 VSEEELLGDV LKDRPQEADG IDSVIVVDNV PQVGPDRLEK LKNVIHKIFS KFGKITNDFY 60
61 PEEDGKTKGY IFLEYASPAH AVDAVKNAD
|
| Detection Method: | |
| Confidence: | 4.16 |
| Match: | 2nlwA |
| Description: | No description for 2nlwA was found. |
|
Region A: Residues: [252-641] |
1 11 21 31 41 51
| | | | | |
1 GYKLDKQHTF RVNLFTDFDK YMTISDEWDI PEKQPFKDLG NLRYWLEEAE CRDQYSVIFE 60
61 SGDRTSIFWN DVKDPVSIEE RARWTETYVR WSPKGTYLAT FHQRGIALWG GEKFKQIQRF 120
121 SHQGVQLIDF SPCERYLVTF SPLMDTQDDP QAIIIWDILT GHKKRGFHCE SSAHWPIFKW 180
181 SHDGKFFARM TLDTLSIYET PSMGLLDKKS LKISGIKDFS WSPGGNIIAF WVPEDKDIPA 240
241 RVTLMQLPTR QEIRVRNLFN VVDCKLHWQK NGDYLCVKVD RTPKGTQGVV TNFEIFRMRE 300
301 KQVPVDVVEM KETIIAFAWE PNGSKFAVLH GEAPRISVSF YHVKNNGKIE LIKMFDKQQA 360
361 NTIFWSPQGQ FVVLAGLRSM NGALAFVDTS
|
| Detection Method: | |
| Confidence: | 68.30103 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [642-741] |
1 11 21 31 41 51
| | | | | |
1 DCTVMNIAEH YMASDVEWDP TGRYVVTSVS WWSHKVDNAY WLWTFQGRLL QKNNKDRFCQ 60
61 LLWRPRPPTL LSQEQIKQIK KDLKKYSKIF EQKDRLSQSK
|
| Detection Method: | |
| Confidence: | 72.522879 |
| Match: | 2h9lA |
| Description: | No description for 2h9lA was found. |
|
Region A: Residues: [742-814] |
1 11 21 31 41 51
| | | | | |
1 ASKELVERRR TMMEDFRKYR KMAQELYMEQ KNERLELRGG VDTDELDSNV DDWEEETIEF 60
61 FVTEEIIPLG NQE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.862 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.727 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.697 | a.7.15 | Description not found. |
| View | Download | 0.603 | a.2.13 | Description not found. |
| View | Download | 0.589 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.536 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.521 | a.7.1 | Spectrin repeat |
| View | Download | 0.513 | a.7.1 | Spectrin repeat |
| View | Download | 0.495 | a.7.8 | GAT domain |
| View | Download | 0.374 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.362 | a.7.8 | GAT domain |
| View | Download | 0.330 | a.74.1 | Cyclin-like |
| View | Download | 0.293 | a.59.1 | PAH2 domain |
