| Protein: | gi|33598968, gi|... |
| Organism: | Homo sapiens |
| Length: | 1349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33598968, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1349] | [1..1349] |
|
|
0.0 | [1..1349] | [1..1349] |
|
|
0.0 | [171..1270] | [1829..2904] |
|
|
0.0 | [149..1266] | [805..1927] |
|
|
0.0 | [152..1266] | [824..1943] |
|
|
0.0 | [152..1290] | [802..1945] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MKKIRICHIF TFYSWMSYDV LFQRTELGAL EIWRQLICAH VCICVGWLYL RDRVCSKKDI 60
61 ILRTEQNSGR TILIKAVTEK NFETKDFRAS LENGVLLCDL INKLKPGVIK KINRLSTPIA 120
121 GLDNINVFLK ACEQIGLKEA QLFHPGDLQD LSNRVTVKQE ETDRRVKNVL ITLYWLGRKA 180
181 QS
|
| Detection Method: |  |
| Confidence: | 21.09691 |
| Match: | 1wynA |
| Description: | Solution structure of the CH domain of human calponin-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [183-533] |
1 11 21 31 41 51
| | | | | |
1 NPYYNGPHLN LKAFENLLGQ ALTKALEDSS FLKRSGRDSG YGDIWCPERG EFLAPPRHHK 60
61 REDSFESLDS LGSRSLTSCS SDITLRGGRE GFESDTDSEF TFKMQDYNKD DMSYRRISAV 120
121 EPKTALPFNR FLPNKSRQPS YVPAPLRKKK PDKHEDNRRS WASPVYTEAD GTFSRLFQKI 180
181 YGENGSKSMS DVSAEDVQNL RQLRYEEMQK IKSQLKEQDQ KWQDDLAKWK DRRKSYTSDL 240
241 QKKKEEREEI EKQALEKSKR SSKTFKEMLQ DRESQNQKST VPSRRRMYSF DDVLEEGKRP 300
301 PTMTVSEASY QSERVEEKGA TYPSEIPKED STTFAKREDR VTTEIQLPSQ S
|
| Detection Method: | |
| Confidence: | 18.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [534-624] |
1 11 21 31 41 51
| | | | | |
1 PVEEQSPASL SSLRSRSTQM ESTRVSASLP RSYRKTDTVR LTSVVTPRPF GSQTRGISSL 60
61 PRSYTMDDAW KYNGDVEDIK RTPNNVVSTP A
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [625-672] |
1 11 21 31 41 51
| | | | | |
1 PSPDASQLAS SLSSQKEVAA TEEDVTRLPS PTSPFSSLSQ DQAATSKA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [673-810] |
1 11 21 31 41 51
| | | | | |
1 TLSSTSGLDL MSESGEGEIS PQREVSRSQD QFSDMRISIN QTPGKSLDFG FTIKWDIPGI 60
61 FVASVEAGSP AEFSQLQVDD EIIAINNTKF SYNDSKEWEE AMAKAQETGH LVMDVRRYGK 120
121 AGSPETKWID ATSGIYNS
|
| Detection Method: | |
| Confidence: | 3.27 |
| Match: | 1uf1A |
| Description: | Solution structure of the second PDZ domain of human KIAA1526 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.84584532725855 | bayes_pls_golite062009 |
| binding | 2.64995560308714 | bayes_pls_golite062009 |
| beta-catenin binding | 1.37028689668988 | bayes_pls_golite062009 |
| receptor binding | 0.626200183605506 | bayes_pls_golite062009 |
| protein domain specific binding | 0.452874488417277 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.37866485872822 | bayes_pls_golite062009 |
|
Region A: Residues: [811-904] |
1 11 21 31 41 51
| | | | | |
1 EKSSNLSVTT DFSESLQSSN IESKEINGIH DESNAFESKA SESISLKNLK RRSQFFEQGS 60
61 SDSVVPDLPV PTISAPSRWV WDQEEERKRQ ERWQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [905-1217] |
1 11 21 31 41 51
| | | | | |
1 KEQDRLLQEK YQREQEKLRE EWQRAKQEAE RENSKYLDEE LMVLSSNSMS LTTREPSLAT 60
61 WEATWSEGSK SSDREGTRAG EEERRQPQEE VVHEDQGKKP QDQLVIERER KWEQQLQEEQ 120
121 EQKRLQAEAE EQKRPAEEQK RQAEIERETS VRIYQYRRPV DSYDIPKTEE ASSGFLPGDR 180
181 NKSRSTTELD DYSTNKNGNN KYLDQIGNMT SSQRRSKKEQ VPSGAELERQ QILQEMRKRT 240
241 PLHNDNSWIR QRSASVNKEP VSLPGIMRRG ESLDNLDSPR SNSWRQPPWL NQPTGFYASS 300
301 SVQDFSRPPP QLV
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [1218-1277] |
1 11 21 31 41 51
| | | | | |
1 STSNRAYMRN PSSSVPPPSA GSVKTSTTGV ATTQSPTPRS HSPSASQSGS QLRNRSVSGK 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1278-1349] |
1 11 21 31 41 51
| | | | | |
1 RICSYCNNIL GKGAAMIIES LGLCYHLHCF KCVACECDLG GSSSGAEVRI RNHQLYCNDC 60
61 YLRFKSGRPT AM
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 2curA |
| Description: | Solution structure of Skeletal muscle LIM-protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47976310866464 | bayes_pls_golite062009 |
| protein binding | 2.06940714324924 | bayes_pls_golite062009 |
| receptor activity | 1.70176463088443 | bayes_pls_golite062009 |
