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View Structure Prediction Details

Protein: MRPS9
Organism: Homo sapiens
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS9.

Description E-value Query
Range
Subject
Range
gi|55599355 - gi|55599355|ref|XP_515671.1| PREDICTED: mitochondrial ribosomal protein S9 [Pan troglodytes]
0.0 [1..396] [1..396]
MRPS9 - mitochondrial ribosomal protein S9
0.0 [1..396] [1..396]
RT09_MOUSE - 28S ribosomal protein S9, mitochondrial OS=Mus musculus GN=Mrps9 PE=1 SV=2
0.0 [1..396] [1..390]
gi|165970703, gi... - gi|62654970|ref|XP_217388.3| PREDICTED: similar to mitochondrial ribosomal protein S9 [Rattus norveg...
0.0 [1..396] [1..390]
gi|109104054 - gi|109104054|ref|XP_001108643.1| PREDICTED: similar to mitochondrial ribosomal protein S9 [Macaca mu...
0.0 [1..396] [1..396]
gi|73969329 - gi|73969329|ref|XP_531774.2| PREDICTED: similar to mitochondrial ribosomal protein S9 isoform 1 [Can...
0.0 [1..396] [1..395]
RT09_BOVIN - (Q58DQ5) 28S ribosomal protein S9, mitochondrial precursor (S9mt) (MRP-S9)
0.0 [1..396] [1..396]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPCVSYGG AVSYRLLLWG RGSLARKQGL WKTAAPELQT NVRSQILRLR HTAFVIPKKN  60
   61 VPTSKRETYT EDFIKKQIEE FNIGKRHLAN MMGEDPETFT QEDIDRAIAY LFPSGLFEKR 120
  121 ARPVMKHPEQ IFPRQRAIQW GEDGRPFHYL FYTGKQSYYS LMHDVYGMLL NLEKHQSHLQ 180
  181 AKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLPEKTVTRD VIGSRWLIKE ELEEMLVEKL SDLDYMQFIR LLEKLLTSQC GAAEEEFVQR  60
   61 FRRSVTLESK KQLIEPVQYD EQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
3'-5'-exoribonuclease activity 1.56111033008721 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [267-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSKSEGKR KTAKAEAIVY KHGSGRIKVN GIDYQLYFPI TQDREQLMFP FHFVDRLGKH  60
   61 DVTCTVSGGG RSAQAGAIRL AMAKALCSFV TEDEVEWMRQ AGLLTTDPRV RERKKPGQEG 120
  121 ARRKFTWKKR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1vs5I
Description: No description for 1vs5I was found.

Predicted functions:

Term Confidence Notes
3'-5'-exoribonuclease activity 1.56111033008721 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle