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View Structure Prediction Details

Protein: MRPS9
Organism: Homo sapiens
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS9.

Description E-value Query
Range
Subject
Range
gi|55599355 - gi|55599355|ref|XP_515671.1| PREDICTED: mitochondrial ribosomal protein S9 [Pan troglodytes]
0.0 [1..396] [1..396]
MRPS9 - mitochondrial ribosomal protein S9
0.0 [1..396] [1..396]
RT09_MOUSE - 28S ribosomal protein S9, mitochondrial OS=Mus musculus GN=Mrps9 PE=1 SV=2
0.0 [1..396] [1..390]
gi|165970703, gi... - gi|62654970|ref|XP_217388.3| PREDICTED: similar to mitochondrial ribosomal protein S9 [Rattus norveg...
0.0 [1..396] [1..390]
gi|109104054 - gi|109104054|ref|XP_001108643.1| PREDICTED: similar to mitochondrial ribosomal protein S9 [Macaca mu...
0.0 [1..396] [1..396]
gi|73969329 - gi|73969329|ref|XP_531774.2| PREDICTED: similar to mitochondrial ribosomal protein S9 isoform 1 [Can...
0.0 [1..396] [1..395]
RT09_BOVIN - (Q58DQ5) 28S ribosomal protein S9, mitochondrial precursor (S9mt) (MRP-S9)
0.0 [1..396] [1..396]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPCVSYGG AVSYRLLLWG RGSLARKQGL WKTAAPELQT NVRSQILRLR HTAFVIPKKN  60
   61 VPTSKRETYT EDFIKKQIEE FNIGKRHLAN MMGEDPETFT QEDIDRAIAY LFPSGLFEKR 120
  121 ARPVMKHPEQ IFPRQRAIQW GEDGRPFHYL FYTGKQSYYS LMHDVYGMLL NLEKHQSHLQ 180
  181 AKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLPEKTVTRD VIGSRWLIKE ELEEMLVEKL SDLDYMQFIR LLEKLLTSQC GAAEEEFVQR  60
   61 FRRSVTLESK KQLIEPVQYD EQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted functions:

Term Confidence Notes
3'-5'-exoribonuclease activity 1.56111033008721 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [267-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSKSEGKR KTAKAEAIVY KHGSGRIKVN GIDYQLYFPI TQDREQLMFP FHFVDRLGKH  60
   61 DVTCTVSGGG RSAQAGAIRL AMAKALCSFV TEDEVEWMRQ AGLLTTDPRV RERKKPGQEG 120
  121 ARRKFTWKKR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1vs5I
Description: No description for 1vs5I was found.

Predicted functions:

Term Confidence Notes
3'-5'-exoribonuclease activity 1.56111033008721 bayes_pls_golite062009

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